>X04415.1/257-296 Human lymphadenopathy virus (MAL isolate), complete genome.
GGACTCGGCTTGCTGAGGTGCACACAGCAAGAGGCGAGAG
>DQ373063.1/241-280 Simian immunodeficiency virus isolate SIVcpzMB66, complete genome.
GGACTCGGCTTGCTGAAGTGCACACGGCAAGAGGCGAGGG
>AF005496.1/41-80 HIV-1 isolate 90CR056 from Central African Republic, complete genome.
GGACTCGGCTTGCTGAAGTGCACACAGCAAGAGGCGAGAG
>FM877779.2/713-751 HIV-1 M_02CD.LBTB032 proviral complete genome, isolate 02CD.LBTB032
AGACTCGGCTTGCTGAGTGCACACGGCAAGAGGCGAGAA
>HQ179987.1/161-200 HIV-1 isolate U14788 from Cameroon gag protein (gag) gene, complete cds; pol protein (pol) gene, partial cds; and vif protein (vif), vpr protein (vpr), truncated tat protein (tat), rev protein (rev), vpu protein (vpu), envelope glycoprotein (env), an
GGGCTCGGCTCAGCGGAGTGCACCTGCTGAGAGGCGAGAG
>L20571.1/701-740 Human immunodeficiency virus type 1, complete genome.
GGGCTCGGCTTAGCGGAGTGCACCTGCTAAGAGGCGAGAG
>DQ373065.1/235-273 Simian immunodeficiency virus isolate SIVcpzEK505, complete genome.
GGACTCGGCTCGTTGAGTGCACACAGCGAGAGGCGAGGC
>M15654.1/16-55 Human immunodeficiency virus type 1, isolate BH10, genome.
GGACTCGGCTTGCTGAAGCGCGCACGGCAAGAGGCGAGGG
>AF077336.1/45-85 HIV-1 isolate VI850 from Democratic Republic of the Congo, complete genome.
GGACTCGGCTTGCTGAAGTGCAACACGGCAAGAGGCGAGAG
>AJ006022.1/254-291 Human immunodeficiency virus type 1 complete proviral genome
GGACTCGGCTCGTTGGTGCACACAGCGAGAGGCGAGGC
>M17449.1/690-729 Human immunodeficiency virus type 1, isolate MN, complete genome.
GGACTCGGCTTGCTGAAGCGCGCACGGCAAGAGGCGAGGG
>AF447763.1/235-273 Simian immunodeficiency virus isolate SIVcpzTAN1, complete genome.
GGACTCGGCTTGTGACAGCGCAATCACAAGAGGCGAGGC
>M17451.1/208-247 Human immunodeficiency virus type 1, isolate RF (HAT-3), complete genome.
GGACTCGGCTTGCTGAAGCGCGCGCGGCAAGAGGCGAGGG
>AF049337.1/61-100 HIV-1 CRF04_cpx clone 94CY032-3 from Cyprus, complete genome.
GGACTCGGCTTGCTGAGGTGCACACAGCAAGAGGCGAGAG
>K03455.1/694-733 Human immunodeficiency virus type 1 (HXB2), complete genome; HIV1/HTLV-III/LAV reference genome.
GGACTCGGCTTGCTGAAGCGCGCACGGCAAGAGGCGAGGG
>FM877781.1/714-752 HIV-1 M_02CD.LBTB084 proviral complete genome, isolate 02CD.LBTB084
GGACTCGGCTTGCTGAGTGCACACAGCAAGAGGCGAGGG
>K03454.1/240-279 Human immunodeficiency virus type 1, isolate ELI, complete genome.
GGACTCGGCTTGCTGAAGCGCGCACGGCAAGAGGCGAGGG
>AF042100.1/691-730 HIV-1 isolate MBC200 from Australia, complete genome.
GGACUCGGCUUGCUGAAGCGCGCACGGCAAGAGGCGAGGG
>AF110973.1/184-223 HIV-1 isolate C-96BW15B03 country Botswana, complete genome.
GGACUCGGCUUGCUGAAGUGCACUCGGCAAGAGGCGAGAG
>AF443085.1/69-108 HIV-1 isolate 99BW4745.8 from Botswana, complete genome.
GGACUCGGCUUGCUGAAGUGCACUCGGCGAGAGGCGAGAG
>AF443113.1/69-108 HIV-1 isolate 00BW3891.6 from Botswana, complete genome.
GGACUCGGCUUGCUGAAGUGUACUCGGCAAGAGGCGAGAG
>AJ288982.1/713-752 Human immunodeficiency virus type 1 complete proviral genome, strain 95ML127 (form Mali)
GGACUCGGCUUGCUGAGGUGCACACAGCAAGAGGCGAGAG
>AF197338.1/656-695 HIV-1 isolate 93TH057 from Thailand, complete genome.
GGACUCGGCUUGCUGAGGUGCACACAGCAAGAGGCAAGAG
>AY161888.1/12-51 HIV-1 isolate 00PTHDE13 from Portugal gag protein (gag) gene, partial cds.
GGACUCGGCUUGCUGAAGUGCACACAGCAAGAGGCGAGAG
>AF492623.1/62-101 HIV-1 isolate 96CM-4496 from Cameroon, complete genome.
GGACUCGGCUUGUUGAGGUGCACACAGCAAGAGGCGAGAG
>AY161885.1/12-51 HIV-1 isolate 00PTHGO7 from Portugal gag protein (gag) gene, partial cds.
GGACUCGGCUUGCUGAGGUGCACACAGCAAGAGGCGAGAA
>AF193275.1/69-108 HIV-1 isolate 97BL006 from Belarus truncated gag polyprotein (gag), truncated pol polyprotein (pol) gene, and envelope glycoprotein (env) gene, complete cds.
GGACUCGGCUUGCUGAGGUGCRCACAGCAAGAGGCGAGAG
>AJ291718.1/701-741 Human immunodeficiency virus type 1 complete genome, Cameroon strain 97CM-MP818
GGAACUCGGCUUGCUGAGGUGCACACAGCAAGAGGCGAAAG
>AF164485.1/717-756 HIV-1 isolate 93TH902.1 from Thailand, complete genome.
GGACUCGGCUUGCUGCGGUGCACACAGCAAGAGGCGAGAC
>AF170549.1/642-681 HIV-1 clone 93TH902-2 country Thailand, partial genome.
GGACUCUGGCUUGCUGCGGUGCACACACAAGAGGCGAGAG
>L39106.1/237-276 Human immunodeficiency virus type 1 gag polyprotein (gag), pol polyprotein (pol), vpr protein (vpr), vif protein (vif), rev protein (rev), vpu protein (vpu), env polyprotein (env), and nef protein (nef) genes, complete cds.
GGACUCGGCUUGCUGAGGUGCGCACAGCAAGAGGCGAGAG
>AY161882.1/12-51 HIV-1 isolate 00PTHSM4 from Portugal gag protein (gag) gene, partial cds.
GGACUCGGCUUGCUGAAGGGCACACAGCAAGAGGCGAGAG
>AY161887.1/12-50 HIV-1 isolate 00PTHDE10 from Portugal gag protein (gag) gene, partial cds.
GGACUCGGCUUGCUGAAGGUGCACACAGCAAGAGCCGAG
>AF061640.1/97-136 HIV-1 isolate HH8793 clone 1.1 from Finland, complete genome.
GGACUCGGCUUGCUGAGGUGCACGCAGCAAGAGGCGAGAG
>AJ293865.1/46-85 Human immunodeficiency virus type 1 genome, A/G/J complex recombinant.
GGACUCGGCUUGCUGAGUGCACGCAGCAAGAGGCGAGGCG
>AJ291720.1/705-745 Human immunodeficiency virus type 1 complete genome, strain 99FR-MP1307
GGACUCGGCUUGCUGAAAGUGCACGCAGCAAGAGGCGAGAG
>AY180905.1/75-114 HIV-1 isolate CNHN24 subtype B-Thai from China, complete genome.
GGACUCGGCUUGCUGAAGCGCGCACAGCAAGAGGCGAGAG
>AB097873.1/63-101 Human immunodeficiency virus 1 proviral DNA, nearly complete genome, isolate:mIDU103.
GGACUCGGCUUGCUGAAGCGCGCACAGCAAGAGGCGAGA
>AB097870.1/72-112 Human immunodeficiency virus 1 proviral DNA, nearly complete genome, isolate:mSTD101.
GGACUCGGCUUGCUGAAAGCGCGCGCAGCAAGAGGCGAGAG
>AF077336.1/45-85 HIV-1 isolate VI850 from Democratic Republic of the Congo, complete genome.
GGACUCGGCUUGCUGAAGUGCAACACGGCAAGAGGCGAGAG
>AF286233.1/39-78 HIV-1 strain 98IS002 from Israel, complete genome.
GGACUCGGCUUGCUAAAGUGCACUUGGCAAGAGGCGAGAG
>AF443098.1/69-108 HIV-1 isolate 00BW1811.3 from Botswana, complete genome.
GGGCUCGGCUUGCUGAAGUGCACUCGGCAAGAGGCGAGAG
>AF110972.1/83-122 HIV-1 isolate C-96BW12.10 country Botswana, complete genome.
GGACUCGGCUUGCUGAAGUGCACUCGGCAAGAGGCGAGGG
>AF290027.1/703-742 HIV-1 clone C.96BW06.H51 from Botswana, complete genome.
GGGCUCGGCUUGCUGAAGUGCAAUCGGCAAGAGGCGAGGG
>AF286223.1/41-80 HIV-1 strain 94IN476 from India, complete genome.
GGACUCGGCUUGCUGAAGUGCACUCAGCAAGAGGCGAGGG
>AF443080.1/69-110 HIV-1 isolate 98BWMO18.d5 from Botswana, complete genome.
GGACUCGGCUUGCUGAAAGUGCACUCGGCAAGAGGCGAGAGG
>AF110981.1/69-108 HIV-1 isolate C-96BW17B05 country Botswana, complete genome.
GGACUCGGCUUGCUGAAGUGCACUCGGCAGGAGGCGAAAG
>AF110974.1/184-223 HIV-1 isolate C-96BW15C02 country Botswana, complete genome.
GGACUCGGCUUGCUGAAUUGCACUCGGCAAGAGGCGAAAG
>AF110979.1/69-108 HIV-1 isolate C-96BW17A09 country Botswana, complete genome.
GGACUUGGCUUGCUGAAGUGCACUCGGCAGGAGGCGAGAG
>AF443114.1/69-108 HIV-1 isolate 00BW3970.2 from Botswana, complete genome.
GGACUCGGCCUGCUGAAGUGCACUCGGCAGGAGGCGAGAG
>AY074891.1/69-108 HIV-1 isolate 00BWMO35.1 from Botswana, complete genome.
GGACUCGGCUUGCUGAAGUGCACUCGGCAGGAGGCGAGAG
>AF443089.1/69-108 HIV-1 isolate 00BW0768.20 from Botswana, complete genome.
GGACUCGGCUUGCUGAAGUGCACUUGGCAAGAGGCGAGAG
>AY118154.1/240-279 HIV-1 isolate 93UG66 from Uganda gag protein (gag) gene, partial cds.
GGACUCGGCUUGCUGAGGUGCACUCGGCAAGAGGCGAGAG
>U86780.1/72-111 HIV-1 clone ZAM184-5.6 from Zambia, complete genome.
GGACUCGGCUUGCUGAAGUGCACCCGGCAAGAGGCGAGAG
>AF443084.1/69-109 HIV-1 isolate 99BW4642.4 from Botswana, complete genome.
GGGAUCGGCUUGCUGAAAGUGCACUCGGCAAGAGGCGAGAG
>AF443107.1/69-108 HIV-1 isolate 00BW2276.7 from Botswana, complete genome.
GGACUCGGCUUGCUGAAGUGCACUCGGCAAGAGGCGAAAG
>AF286238.1/40-80 HIV-1 isolate 97CDKTB48 from Republic of the Congo, complete genome.
AGACUCGGCUUGCUGAGGUGCACACGGCAAGAGGCGAGAAG
>AY161889.1/12-52 HIV-1 isolate 00PTHDE14 from Portugal gag protein (gag) gene, partial cds.
GGACUCGGCUUGCUGAAGGUGCACACGGCGAGAGGCGAGAG
>K02007.1/695-734 Human immunodeficiency virus type 1, isolate ARV-2/SF2, complete proviral genome.
GGACUCGGCUUGCUGAAGCGCGCACAGCAAGAGGCGAGGG
>AF408626.1/118-157 HIV-1 isolate A025 from Argentina, complete genome.
GGACUCGGCUUGCUGAAGCGCGCGCGGCAAGAGGCGAGGG
>AF286242.1/173-213 HIV-1 isolate 94CY017.1g from Cyprus gag protein (gag) gene, complete cds.
GGACUCGGCUUGCUGAGGUGCACACGGCAAGAGGCGAGGGG
>AF408632.1/261-300 HIV-1 isolate A32878 from Argentina, complete genome.
GGACUCGGCUUGCUGAAGUGCACACGGCAAGAGGCGAGGG
>AF190127.1/72-112 HIV-1 isolate VI991 from Belgium Gag polyprotein (gag), Pol polyprotein (pol), Vif (vif), Vpr (vpr), truncated Tat (tat), Rev (rev), truncated Vpu (vpu), envelope glycoprotein precursor (env), and Nef (nef) genes, complete cds.
GGACUCGGCUUGCUGAAGUGCACACAGCAAGAGGCGAGGGG
>AF086817.1/693-733 HIV-1 strain LM49 isolate TWCYS from Taiwan, complete genome.
GGACUCGGCUUGCUGAAGUGCGCACGGCAAGAGGCGAGGGG
>AF385935.1/714-752 HIV-1 isolate URTR35 from Uruguay, complete genome.
GGACUCGGCUUGCUGAGGCGCACGGCAAGAGGCGAGGAG
>AF442565.1/60-101 HIV-1 clone TZBFL0025 from Tanzania, partial genome.
GGACCCGGCUUGCCUGAAGCGCGCACGGCAAGAGGCGGGGGG
>AF442570.1/57-96 HIV-1 clone TZBFL0088 from Tanzania, partial genome.
GGACUCGGCUUGCUGAAGCGCGCGCAGCAAGAGGCGAGGG
>AF465242.1/767-806 Simian-Human immunodeficiency virus isolate 1B3, complete genome.
GGACUCGGCUUGCUGAAGCGCGCACGGCAAGCGGCGAGGG
>AF193253.1/70-109 HIV-1 subtype F/D isolate VI1310 from Belgium gag protein (gag), pol protein (pol), vif protein (vif), vpr protein (vpr), tat protein (tat), rev protein (rev), vpu  protein (vpu), envelope glycoprotein (env), and nef protein (nef) genes, co
GGACUCGGCUUGCUGAAGCGCGCAAGGCAAGAGGCGAGGG
>U88822.1/208-248 HIV-1 isolate 84zr085 from Zaire complete genome.
GGACUCGGCUUGCUGAAAGCGCGCUCGGCAAGAGGCGAGGG
>AF538305.1/694-733 HIV-1 clone C42 from Australia gag protein (gag) gene, complete cds; truncated pol protein (pol) gene, partial cds; and vif protein (vif), vpr protein (vpr), tat protein (tat), rev protein (rev), vpu protein (vpu), envelope glycoprotein (en
AGACUCGGCUUGCUGAAGCGCGCAUAGCAAGAGGCGAGGG
>AF538306.1/693-733 HIV-1 clone C76 from Australia gag protein (gag) gene, complete cds; pol protein (pol) gene, partial cds; and vif protein (vif), vpr protein (vpr), tat protein (tat), rev protein (rev), vpu protein (vpu), envelope glycoprotein (env), and ne
GGACUCUGCUUGCUGAAGCGCGCACAGCAAGAGGCGAGGGG
>AF423755.1/144-183 HIV-1 isolate X254 from Spain, complete genome.
GGACUCGGCUUGCUGCAGCGCGCACGGCAAGAGGCGAGGG
>U26546.1/74-113 Human immunodeficiency virus type 1 clade B, proviral clone.
GGACUCAGCUUGCUGAAGCGCGCACGGCAAGAGGCGAGGG
>AY062241.1/3-42 HIV-1 isolate Dgag4 from USA gag protein (gag) gene, partial cds.
GGACUCGGCUUGCUGAAGCGCGCGCAGCAAGAGGCGAGUG
>AY161886.1/12-51 HIV-1 isolate 00PTHDE9 from Portugal gag protein (gag) gene, partial cds.
GGACUCGGCUUGCUGAAACGCGUACGGCAAGAGGCGAGGG
>AF538304.1/695-734 HIV-1 clone C24 from Australia gag protein (gag) gene, complete cds; pol protein (pol) gene, partial cds; and vif protein (vif), vpr protein (vpr), tat protein (tat), rev protein (rev), vpu protein (vpu), envelope glycoprotein (env), and ne
GGACUCGGCUUGCUGAAACGCGCGCGGCAAGAGGCGAGGG
>AB078005.1/649-688 Human immunodeficiency virus 1 DNA, complete genome, clone:ARES2.
GGACUCGGCUUGSUGAAGCGCGCACGGCAAGAGGCGAGGG
>AF042101.1/695-734 HIV-1 isolate MBC925 from Australia, complete genome.
GGACUCGGCUUGCUGUAGCGCGCACGGCAAGAGGCGAGGG
>AF005495.1/41-80 HIV-1 isolate 93br029 from Brazil complete genome.
GGACUCGGCUUGCUGAAGCGCGCACGGCAGGAGGCGAGGG
>AF115393.1/68-106 Simian immunodeficiency virus strain SIVcpz, complete genome.
GGACUCGGCUUGCUGAGUGCACACAGCGAGAGGCGAGGC
>EF394358.1/234-272 Simian immunodeficiency virus isolate SIVcpzTAN3, complete genome.
GGACUCGGCUUGUGACAGCGCAAUCACAAGAGGCGAGGC
>DQ373065.1/235-273 Simian immunodeficiency virus isolate SIVcpzEK505, complete genome.
GGACUCGGCUCGUUGAGUGCACACAGCGAGAGGCGAGGC
>AF382828.1/48-88 Simian immunodeficiency virus isolate SIVcpzGAB2 complete genome.
GGACUCGACUUGCUGUAGUGCACAACAGCGAGAGGCGAGGC
>U42720.2/35-74 Simian immunodeficiency virus Gag protein (gag) gene, complete cds; Pol protein (pol) gene, partial cds; and Vif protein (vif), Vpr protein (vpr), Tat protein (tat), Rev protein (rev), Vpu protein (vpu), Env protein (env), and Nef protein (
GGACUCGGUCUGCUGCAGCGCGCGUAGCAGAAGGCGAGGC
>AJ271369.1/371-409 Simian immunodeficiency virus complete proviral genome, strain SIVCPZ CAM5
GGACUCGGCUUACUGAGUGCACGCAGUAAGAGGCGAGGC
>AY169968.1/238-276 Simian immunodeficiency virus isolate SIVcpzCAM13, complete genome.
GGACUCGGCUUGUUGAGUGCACACAACAAGAGGCGAGGC
