>AY994055.1/12410-12484 Feline infectious peritonitis virus, complete genome.
GAGTGCGGGGTTCTAGTGCAGCTCGACTAGAACCCTGTAATGGTACTGATCCAGACCATGTTAGTAGAGCTTTTG
>JQ404410.1/12341-12415 Canine coronavirus strain TN-449, complete genome.
GAGTGCGGGGTTCTAGTGCAGCTCGACTAGAACCCTGTAATGGTACTGATCCAGACCATGTTAGTAGAGCTTTTG
>KC461235.1/12410-12484 Feline infectious peritonitis virus isolate FCoVWSU791146_P1, complete genome.
GAGTGCGGGGTTCTAGTGCAGCTCGACTAGAACCCTGTAATGGTACTGATCCAGACCATGTTAGTAGAGCTTTTG
>KP849472.1/12329-12403 Alphacoronavirus 1 strain 23/03, complete genome.
GAGTGCGGGGTTCTAGTGCAGCTCGACTAGAACCCTGTAATGGTACTGATCCAGACCATGTTAGTAGAGCTTTTG
>KU215420.1/12348-12422 Feline coronavirus isolate Cat1_day7, complete genome.
GAGTGCGGGGTTCTAGTGCAGCTCGACTAGAACCCTGTAATGGTACTGATCCAGACCATGTTAGTAGAGCTTTTG
>JX993988.1/13298-13375 Bat coronavirus Cp/Yunnan2011, complete genome.
GGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGCACTAGTACTGATGTCGTTTACAGGGCTTTTG
>LC528232.1/13472-13549 Severe acute respiratory syndrome coronavirus 2 SARS-CoV-2/Hu/DP/Kng/19-020 RNA, complete genome
GGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGCACTAGTACTGATGTCGTATACAGGGCTTTTG
>LC528233.1/13477-13554 Severe acute respiratory syndrome coronavirus 2 SARS-CoV-2/Hu/DP/Kng/19-027 RNA, complete genome
GGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGCACTAGTACTGATGTCGTATACAGGGCTTTTG
>LC529905.1/13469-13546 Severe acute respiratory syndrome coronavirus 2 TKYE6182_2020 RNA, complete genome
GGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGCACTAGTACTGATGTCGTATACAGGGCTTTTG
>LR757995.1/13454-13531 Wuhan seafood market pneumonia virus genome assembly, chromosome: whole_genome
GGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGCACTAGTACTGATGTCGTATACAGGGCTTTTG
>LR757998.1/13444-13521 Wuhan seafood market pneumonia virus genome assembly, chromosome: whole_genome
GGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGCACTAGTACTGATGTCGTATACAGGGCTTTTG
>MN908947.3/13469-13546 Severe acute respiratory syndrome coronavirus 2 isolate Wuhan-Hu-1, complete genome
GGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGCACTAGTACTGATGTCGTATACAGGGCTTTTG
>MN938384.1/13437-13514 Severe acute respiratory syndrome coronavirus 2 isolate 2019-nCoV_HKU-SZ-002a_2020, complete genome
GGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGCACTAGTACTGATGTCGTATACAGGGCTTTTG
>MN975262.1/13469-13546 Severe acute respiratory syndrome coronavirus 2 isolate 2019-nCoV_HKU-SZ-005b_2020, complete genome
GGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGCACTAGTACTGATGTCGTATACAGGGCTTTTG
>MN988713.1/13469-13546 Severe acute respiratory syndrome coronavirus 2 isolate 2019-nCoV/USA-IL1/2020, complete genome
GGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGCACTAGTACTGATGTCGTATACAGGGCTTTTG
>MN994467.1/13469-13546 Severe acute respiratory syndrome coronavirus 2 isolate 2019-nCoV/USA-CA1/2020, complete genome
GGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGCACTAGTACTGATGTCGTATACAGGGCTTTTG
>MN994468.1/13469-13546 Severe acute respiratory syndrome coronavirus 2 isolate 2019-nCoV/USA-CA2/2020, complete genome
GGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGCACTAGTACTGATGTCGTATACAGGGCTTTTG
>MN996527.1/13436-13513 Severe acute respiratory syndrome coronavirus 2 isolate WIV02, complete genome
GGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGCACTAGTACTGATGTCGTATACAGGGCTTTTG
>MN996529.1/13457-13534 Severe acute respiratory syndrome coronavirus 2 isolate WIV05, complete genome
GGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGCACTAGTACTGATGTCGTATACAGGGCTTTTG
>MN996531.1/13456-13533 Severe acute respiratory syndrome coronavirus 2 isolate WIV07, complete genome
GGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGCACTAGTACTGATGTCGTATACAGGGCTTTTG
>MN997409.1/13469-13546 Severe acute respiratory syndrome coronavirus 2 isolate 2019-nCoV/USA-AZ1/2020, complete genome
GGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGCACTAGTACTGATGTCGTATACAGGGCTTTTG
>MT007544.1/13469-13546 Severe acute respiratory syndrome coronavirus 2 isolate Australia/VIC01/2020, complete genome
GGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGCACTAGTACTGATGTCGTATACAGGGCTTTTG
>MT012098.1/13456-13533 Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/29/human/2020/IND, complete genome
GGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGCACTAGTACTGATGTCGTATACAGGGCTTTTG
>MT019529.1/13469-13546 Severe acute respiratory syndrome coronavirus 2 isolate BetaCoV/Wuhan/IPBCAMS-WH-01/2019, complete genome
GGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGCACTAGTACTGATGTCGTATACAGGGCTTTTG
>MT019530.1/13469-13546 Severe acute respiratory syndrome coronavirus 2 isolate BetaCoV/Wuhan/IPBCAMS-WH-02/2019, complete genome
GGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGCACTAGTACTGATGTCGTATACAGGGCTTTTG
>MT019531.1/13469-13546 Severe acute respiratory syndrome coronavirus 2 isolate BetaCoV/Wuhan/IPBCAMS-WH-03/2019, complete genome
GGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGCACTAGTACTGATGTCGTATACAGGGCTTTTG
>MT019533.1/13469-13546 Severe acute respiratory syndrome coronavirus 2 isolate BetaCoV/Wuhan/IPBCAMS-WH-05/2020, complete genome
GGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGCACTAGTACTGATGTCGTATACAGGGCTTTTG
>MT020781.2/13469-13546 Severe acute respiratory syndrome coronavirus 2 isolate nCoV-FIN-29-Jan-2020, partial genome
GGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGCACTAGTACTGATGTCGTATACAGGGCTTTTG
>MT020881.1/13469-13546 Severe acute respiratory syndrome coronavirus 2 isolate 2019-nCoV/USA-WA1-F6/2020, complete genome
GGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGCACTAGTACTGATGTCGTATACAGGGCTTTTG
>MT027063.1/13469-13546 Severe acute respiratory syndrome coronavirus 2 isolate 2019-nCoV/USA-CA4/2020, complete genome
GGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGCACTAGTACTGATGTCGTATACAGGGCTTTTG
>MT027064.1/13469-13546 Severe acute respiratory syndrome coronavirus 2 isolate 2019-nCoV/USA-CA5/2020, complete genome
GGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGCACTAGTACTGATGTCGTATACAGGGCTTTTG
>MT039887.1/13469-13546 Severe acute respiratory syndrome coronavirus 2 isolate 2019-nCoV/USA-WI1/2020, complete genome
GGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGCACTAGTACTGATGTCGTATACAGGGCTTTTG
>MT039888.1/13469-13546 Severe acute respiratory syndrome coronavirus 2 isolate 2019-nCoV/USA-MA1/2020, complete genome
GGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGCACTAGTACTGATGTCGTATACAGGGCTTTTG
>MT039890.1/13469-13546 Severe acute respiratory syndrome coronavirus 2 isolate SNU01, complete genome
GGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGCACTAGTACTGATGTCGTATACAGGGCTTTTG
>MT044257.1/13469-13546 Severe acute respiratory syndrome coronavirus 2 isolate 2019-nCoV/USA-IL2/2020, complete genome
GGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGCACTAGTACTGATGTCGTATACAGGGCTTTTG
>MT044258.1/13445-13522 Severe acute respiratory syndrome coronavirus 2 isolate 2019-nCoV/USA-CA6/2020, complete genome
GGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGCACTAGTACTGATGTCGTATACAGGGCTTTTG
>MT049951.1/13469-13546 Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/Yunnan-01/human/2020/CHN, complete genome
GGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGCACTAGTACTGATGTCGTATACAGGGCTTTTG
>MT050493.1/13449-13526 Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/166/human/2020/IND, complete genome
GGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGCACTAGTACTGATGTCGTATACAGGGCTTTTG
>MT066156.1/13469-13546 Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/INMI1/human/2020/ITA, complete genome
GGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGCACTAGTACTGATGTCGTATACAGGGCTTTTG
>MT066175.1/13469-13546 Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/NTU01/2020/TWN, complete genome
GGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGCACTAGTACTGATGTCGTATACAGGGCTTTTG
>MT066176.1/13469-13546 Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/NTU02/2020/TWN, complete genome
GGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGCACTAGTACTGATGTCGTATACAGGGCTTTTG
>MT072688.1/13454-13531 Severe acute respiratory syndrome coronavirus 2 isolate SARS0CoV-2/61-TW/human/2020/ NPL, complete genome
GGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGCACTAGTACTGATGTCGTATACAGGGCTTTTG
>MT093571.1/13469-13546 Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/01/human/2020/SWE, complete genome
GGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGCACTAGTACTGATGTCGTATACAGGGCTTTTG
>MT093631.2/13456-13533 Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/WH-09/human/2020/CHN, complete genome
GGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGCACTAGTACTGATGTCGTATACAGGGCTTTTG
>MT106052.1/13469-13546 Severe acute respiratory syndrome coronavirus 2 isolate 2019-nCoV/USA-CA7/2020, complete genome
GGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGCACTAGTACTGATGTCGTATACAGGGCTTTTG
>MT106053.1/13469-13546 Severe acute respiratory syndrome coronavirus 2 isolate 2019-nCoV/USA-CA8/2020, complete genome
GGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGCACTAGTACTGATGTCGTATACAGGGCTTTTG
>MT106054.1/13469-13546 Severe acute respiratory syndrome coronavirus 2 isolate 2019-nCoV/USA-TX1/2020, complete genome
GGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGCACTAGTACTGATGTCGTATACAGGGCTTTTG
>MT118835.1/13469-13546 Severe acute respiratory syndrome coronavirus 2 isolate 2019-nCoV/USA-CA9/2020, complete genome
GGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGCACTAGTACTGATGTCGTATACAGGGCTTTTG
>MT121215.1/13469-13546 Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/SH01/human/2020/CHN, complete genome
GGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGCACTAGTACTGATGTCGTATACAGGGCTTTTG
>MT123290.1/13472-13549 Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/IQTC01/human/2020/CHN, complete genome
GGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGCACTAGTACTGATGTCGTATACAGGGCTTTTG
>MT123291.2/13466-13543 Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/IQTC02/human/2020/CHN, complete genome
GGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGCACTAGTACTGATGTCGTATACAGGGCTTTTG
>MT123292.2/13469-13546 Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/IQTC04/human/2020/CHN, complete genome
GGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGCACTAGTACTGATGTCGTATACAGGGCTTTTG
>MT123293.2/13463-13540 Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/IQTC03/human/2020/CHN, complete genome
GGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGCACTAGTACTGATGTCGTATACAGGGCTTTTG
>MT126808.1/13469-13546 Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/SP02/human/2020/BRA, complete genome
GGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGCACTAGTACTGATGTCGTATACAGGGCTTTTG
>MT135043.1/13469-13546 Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/233/human/2020/CHN, complete genome
GGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGCACTAGTACTGATGTCGTATACAGGGCTTTTG
>MT135044.1/13469-13546 Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/235/human/2020/CHN, complete genome
GGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGCACTAGTACTGATGTCGTATACAGGGCTTTTG
>MT152824.1/13467-13544 Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/WA2/human/2020/USA, complete genome
GGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGCACTAGTACTGATGTCGTATACAGGGCTTTTG
>MT159705.1/13469-13546 Severe acute respiratory syndrome coronavirus 2 isolate 2019-nCoV/USA-CruiseA-7/2020, complete genome
GGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGCACTAGTACTGATGTCGTATACAGGGCTTTTG
>MT159706.1/13469-13546 Severe acute respiratory syndrome coronavirus 2 isolate 2019-nCoV/USA-CruiseA-8/2020, complete genome
GGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGCACTAGTACTGATGTCGTATACAGGGCTTTTG
>MT159707.1/13469-13546 Severe acute respiratory syndrome coronavirus 2 isolate 2019-nCoV/USA-CruiseA-10/2020, complete genome
GGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGCACTAGTACTGATGTCGTATACAGGGCTTTTG
>MT159708.1/13469-13546 Severe acute respiratory syndrome coronavirus 2 isolate 2019-nCoV/USA-CruiseA-11/2020, complete genome
GGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGCACTAGTACTGATGTCGTATACAGGGCTTTTG
>MT159709.1/13469-13546 Severe acute respiratory syndrome coronavirus 2 isolate 2019-nCoV/USA-CruiseA-12/2020, complete genome
GGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGCACTAGTACTGATGTCGTATACAGGGCTTTTG
>MT159712.1/13469-13546 Severe acute respiratory syndrome coronavirus 2 isolate 2019-nCoV/USA-CruiseA-14/2020, complete genome
GGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGCACTAGTACTGATGTCGTATACAGGGCTTTTG
>MT159715.1/13469-13546 Severe acute respiratory syndrome coronavirus 2 isolate 2019-nCoV/USA-CruiseA-17/2020, complete genome
GGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGCACTAGTACTGATGTCGTATACAGGGCTTTTG
>MT159716.1/13454-13531 Severe acute respiratory syndrome coronavirus 2 isolate 2019-nCoV/USA-CruiseA-18/2020, complete genome
GGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGCACTAGTACTGATGTCGTATACAGGGCTTTTG
>MT159717.1/13469-13546 Severe acute respiratory syndrome coronavirus 2 isolate 2019-nCoV/USA-CruiseA-1/2020, complete genome
GGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGCACTAGTACTGATGTCGTATACAGGGCTTTTG
>MT159718.1/13469-13546 Severe acute respiratory syndrome coronavirus 2 isolate 2019-nCoV/USA-CruiseA-2/2020, complete genome
GGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGCACTAGTACTGATGTCGTATACAGGGCTTTTG
>MT159720.1/13469-13546 Severe acute respiratory syndrome coronavirus 2 isolate 2019-nCoV/USA-CruiseA-4/2020, complete genome
GGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGCACTAGTACTGATGTCGTATACAGGGCTTTTG
>MT159722.1/13469-13546 Severe acute respiratory syndrome coronavirus 2 isolate 2019-nCoV/USA-CruiseA-6/2020, complete genome
GGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGCACTAGTACTGATGTCGTATACAGGGCTTTTG
>MT163716.1/13469-13546 Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/WA3-UW1/human/2020/USA, complete genome
GGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGCACTAGTACTGATGTCGTATACAGGGCTTTTG
>MT163717.1/13463-13540 Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/WA4-UW2/human/2020/USA, complete genome
GGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGCACTAGTACTGATGTCGTATACAGGGCTTTTG
>MT163718.1/13469-13546 Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/WA6-UW3/human/2020/USA, complete genome
GGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGCACTAGTACTGATGTCGTATACAGGGCTTTTG
>MT163719.1/13469-13546 Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/WA7-UW4/human/2020/USA, complete genome
GGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGCACTAGTACTGATGTCGTATACAGGGCTTTTG
>MT163720.1/13298-13375 Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/WA8-UW5/human/2020/USA, partial genome
GGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGCACTAGTACTGATGTCGTATACAGGGCTTTTG
>MT163721.1/12891-12968 Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/WA9-UW6/human/2020/USA, partial genome
GGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGCACTAGTACTGATGTCGTATACAGGGCTTTTG
>MT184908.1/13469-13546 Severe acute respiratory syndrome coronavirus 2 isolate 2019-nCoV/USA-CruiseA-21/2020, complete genome
GGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGCACTAGTACTGATGTCGTATACAGGGCTTTTG
>MT184910.1/13469-13546 Severe acute respiratory syndrome coronavirus 2 isolate 2019-nCoV/USA-CruiseA-23/2020, complete genome
GGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGCACTAGTACTGATGTCGTATACAGGGCTTTTG
>MT184911.1/13469-13546 Severe acute respiratory syndrome coronavirus 2 isolate 2019-nCoV/USA-CruiseA-24/2020, complete genome
GGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGCACTAGTACTGATGTCGTATACAGGGCTTTTG
>MT184912.1/13469-13546 Severe acute respiratory syndrome coronavirus 2 isolate 2019-nCoV/USA-CruiseA-25/2020, complete genome
GGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGCACTAGTACTGATGTCGTATACAGGGCTTTTG
>MT184913.1/13469-13546 Severe acute respiratory syndrome coronavirus 2 isolate 2019-nCoV/USA-CruiseA-26/2020, complete genome
GGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGCACTAGTACTGATGTCGTATACAGGGCTTTTG
>MT188339.1/13415-13492 Severe acute respiratory syndrome coronavirus 2 isolate USA/MN3-MDH3/2020, complete genome
GGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGCACTAGTACTGATGTCGTATACAGGGCTTTTG
>MT188340.1/13415-13492 Severe acute respiratory syndrome coronavirus 2 isolate USA/MN2-MDH2/2020, complete genome
GGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGCACTAGTACTGATGTCGTATACAGGGCTTTTG
>MT188341.1/13415-13492 Severe acute respiratory syndrome coronavirus 2 isolate USA/MN1-MDH1/2020, complete genome
GGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGCACTAGTACTGATGTCGTATACAGGGCTTTTG
>MT192765.1/13462-13539 Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/PC00101P/human/2020/USA, complete genome
GGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGCACTAGTACTGATGTCGTATACAGGGCTTTTG
>MT192772.1/13469-13546 Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/nCoV-19-01S/human/2020/VNM, complete genome
GGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGCACTAGTACTGATGTCGTATACAGGGCTTTTG
>MT192773.1/13468-13545 Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/nCoV-19-02S/human/2020/VNM, complete genome
GGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGCACTAGTACTGATGTCGTATACAGGGCTTTTG
>NC_045512.2/13469-13546 Severe acute respiratory syndrome coronavirus 2 isolate Wuhan-Hu-1, complete genome
GGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGCACTAGTACTGATGTCGTATACAGGGCTTTTG
>AB257344.1/13358-13435 SARS coronavirus Frankfurt 1 genomic RNA, nearly complete genome, clone: persistent virus #21.
GGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGCACTAGTACTGATGTCGTCTACAGGGCTTTTG
>AY274119.3/13399-13476 SARS coronavirus TOR2, complete genome.
GGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGCACTAGTACTGATGTCGTCTACAGGGCTTTTG
>KU182964.1/12801-12878 Bat coronavirus isolate JTMC15, complete genome.
GGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGCACTAGCACTGATGTCGTTTACAGGGCTTTTG
>AF353511.1/12621-12695 Porcine epidemic diarrhea virus strain CV777, complete genome.
GAGTACGGGGCTCTAGTGCAGCTCGACTAGAGCCCTGTAATGGTACTGATACACAACATGTGTATCGTGCTTTTG
>AJ271965.2/12339-12413 Transmissible gastroenteritis virus complete genome, genomic RNA
GAGTGCGGGGTTCTAGTGCAGCTCGACTAGAACCCTGCAATGGTACTGATCCAGACCATGTTAGTAGAGCTTTTG
>KT696544.1/12339-12413 Transmissible gastroenteritis virus strain JS2012, complete genome.
GAGTGCGGGGTTCTAGTGCAGCTCGACTAGAACCCTGCAATGGTACTGATCCAGACCATGTTAGTAGAGCTTTTG
>KP886808.1/13398-13475 Bat SARS-like coronavirus YNLF_31C, complete genome.
GGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGCATTAGTACTGATGTCGTCTACAGGGCTTTTG
>KF430219.1/12533-12607 Bat coronavirus CDPHE15/USA/2006, complete genome.
GAGCAAGGGGCTCTAGTGCAGCTCGACTAGAGCCCTGTAATGGCACTGATACTGATCATGTGTATCGTGCTTTTG
>KJ473809.1/11986-12060 BtNv-AlphaCoV/SC2013, complete genome.
GAGTACGGGGCTCTAGTGCAGCTCGACTAGAGCCCTGTAATGGTTCCGAAACGGACCATGTTGTGCGTGCTTTTG
>KY967717.1/11208-11285 Wencheng Sm shrew coronavirus isolate Xingguo-101 ORF1ab polyprotein, spike glycoprotein, envelope protein, membrane protein, and nucleocapsid protein genes, complete cds.
GGGCAAGGGGTTCTAGTGGAGCTCGACTAGAACCCTGTGGTAATGGTACTGAACCTGATGTAGTTGTAAGAGCTTTTG
>DQ412043.1/13413-13490 Bat SARS coronavirus Rm1, complete genome.
GGGTTTGCGGTGTAAGTGCGGCCCGTCTTACACCGTGCGGCACAGGCACTAGCACTGATGTCGTTTACAGGGCTTTTG
>KM347965.1/12123-12197 Ferret coronavirus isolate FRCoV-NL-2010, complete genome.
GAGTACGGGGTTCTAGTGGAGCTCGACTAGAACCCTGCAATGGTACAAACCCTGATTGTGTTACCAGGGCCTTTG
>KJ778615.1/12617-12691 Porcine epidemic diarrhea virus isolate NPL-PEDv/2013, complete genome.
GAGTACGGGGCTCTAGTGCAGCTCGACTAGAGCCCTGTAACGGTACTGATACACAACATGTGTATCGTGCTTTTG
>EU420139.1/12936-13010 Bat coronavirus HKU8 strain AFCD77, complete genome.
GAGTGCGGGGCTCTAGTGCAGCTCGACTAGAGCCCTGTAATGGTACTGAACCAGAACACGTAATCCGTGCCTTTG
>KJ473797.1/12937-13011 BtMf-AlphaCoV/GD2012, complete genome.
GAGTGCGGGGCTCTAGTGCAGCTCGACTAGAGCCCTGTAATGGTACTGAACCAGAACACGTAATCCGTGCCTTTG
>DQ648858.1/12651-12725 Bat coronavirus (BtCoV/512/2005) ORF1, spike protein, putative ORF3, envelope protein, matrix protein, and nucleocapsid protein genes, complete cds.
GAGTGCGGGGCTCTAGTGCAGCTCGACTAGAGCCCTTAAATGGTTCGGACACACATCATGTGTTCCGTGCTTTTG
>HM245926.1/12264-12338 Mink coronavirus strain WD1133, complete genome.
GAGTACGGGGTTCTAGTGGAGCTCGACTAGAACCCTGCAACGGTACAAGCCCTGATTGTGTTACAAGGGCTTTTG
>KJ473808.1/12252-12326 BtRf-AlphaCoV/YN2012, complete genome.
GGGCAAGGGGCTCTAGTGCAGCTCGACTAGAGCCCTGTAATGGTACTGAACCAGAACATTGTGTTCGTGCTTTTG
>KT368907.1/12536-12610 Camel alphacoronavirus isolate camel/Riyadh/Ry141/2015, complete genome.
GAGTCAGGGGCTCTAGTGCCGCTCGACTAGAGCCCTGCAATGGTACAGACATAGATTATTGTGTCCGTGCATTTG
>EU420138.1/13049-13123 Bat coronavirus 1A strain AFCD62, complete genome.
GAGCAAGGGGCTCTAGTGCAGCTCGACTAGAGCCCTGTAATGGTACTGAACCGGAGCATGTTGTACGCGCCTTTG
>KU762338.1/13084-13164 Rousettus bat coronavirus isolate GCCDC1 356, complete genome.
GAGTCCGGGGTGCTAGTGGAGTAGCCCGCCTAGTACCCCAAGGCATAGGTGTTCAGCCTGATGTCGTTTTAAGGGCTTTTG
>AF304460.1/12521-12595 Human coronavirus 229E, complete genome.
GAGTCCGGGGCTCTAGTGCCGCTCGACTAGAGCCCTGTAATGGTACAGACATAGATTACTGTGTCCGTGCATTTG
>KY073744.1/12473-12547 NL63-related bat coronavirus strain BtKYNL63-9a, complete genome.
GAGCAAGGGGCTCTAGTGCAGCTCGACTAGAGCCCTGTAATGGCACGGACATAGATAAGTGTGTTCGTGCTTTTG
>JQ989267.1/12621-12695 Hipposideros bat coronavirus HKU10 isolate SL12A, complete genome.
GAGCAAGGGGCTCTAGTGCAGCTCAACTAGAGCCCTGCAATGGCACTGACACTGATCATTGTGTCAGAGCATTTG
>KC545383.1/13585-13665 Betacoronavirus Erinaceus/VMC/DEU/2012 isolate ErinaceusCoV/2012-174/GER/2012, complete genome.
GAGTCAGGGGTTCTATTGTAGATGCCCGAATAGAACCCTGTGCAAGTGGTCTTGCCACTGATGTCGTTTATAGGGCATTTG
>KF793825.1/12385-12462 Bottlenose dolphin coronavirus HKU22 isolate CF090327, complete genome.
GGGTACGGGGTCTCAGTGAAGCTCGACTGAGGCCCTGTGCATCGGGATTGTTACCTGATGTTGTTAAAAGAGCTTTTG
>KF636752.1/13932-14009 Bat Hp-betacoronavirus/Zhejiang2013, complete genome.
GGGTGCGCGGTGTAAGTGCAGCCCGTCTTACACCGTGTGGCAGTGGTCTTTCCACTGACGTCGTCGTAAGGGCTTTCG
>EF065509.1/13686-13766 Bat coronavirus HKU5-1, complete genome.
GAGTCCGGGGTTCTATTGTAAATGCCCGAATAGAACCCTGTGCCAGTGGTCTTACCACTGATGTTGTCTTTAGGGCATTTG
>EF065510.1/13682-13762 Bat coronavirus HKU5-2, complete genome.
GAGTCCGGGGTTCTATTGTAAATGCCCGAATAGAACCCTGTGCCAGTGGTCTTACCACTGATGTTGTCTTTAGGGCATTTG
>DQ011855.1/13342-13422 Porcine hemagglutinating encephalomyelitis virus strain VW572, complete genome.
GGGTTCGGGGTACGAGTGTAGATGCCCGTCTCGTACCCTGTGCCAGTGGTTTATCTACTGATGTACAATTAAGGGCATTTG
>DQ648794.1/13565-13645 Bat coronavirus (BtCoV/133/2005), complete genome.
GAGTCCGGGGTTCTAGTGTAAATGCCCGACTAGAACCCTGTTCAAGTGGTCTAACCACTGATGTCGTTTATAGGGCATTCG
>DQ915164.2/13342-13422 Bovine coronavirus isolate Alpaca, complete genome.
GGGTTCGGGGTACGAGTGTAGATGCCCGTCTCGTACCCTGTGCCAGTGGTTTATCTACTGATGTACAATTAAGGGCATTTG
>EF065505.1/13551-13631 Bat coronavirus HKU4-1, complete genome.
GAGTCCGGGGTTCTAGTGTAAATGCCCGACTAGAACCCTGTTCAAGTGGTCTAACCACTGATGTCGTTTATAGGGCATTCG
>KM349742.1/13485-13565 Betacoronavirus HKU24 strain HKU24-R05005I, complete genome.
GGGTTCGGGGTGCGAGTGTAGATGCCCGTCTCGTACCCTGTGCCAGTGGTTTATCTACTGATGTTCAAAAAAGGGCATTTG
>EF065514.1/12876-12956 Bat coronavirus HKU9-2, complete genome.
GAGTTAGGGGTACTAGTGGAGTAGCCCGTCTAGTACCCCTAGGTTCTGGTGTTCAACCAGATGTAGTATTAAGGGCTTTTG
>AY597011.2/13601-13681 Human coronavirus HKU1 genotype A, complete genome.
GGGTTCGGGGTACTAGTGTGAATGCCCGGCTAGTACCCTGTGCTAGTGGTTTATCTACTGATGTTCAATTAAGGGCATTTG
>DQ339101.1/13445-13525 Human coronavirus HKU1 strain N5P8 genotype A/B recombinant, complete genome.
GGGTTAGGGGTACTAGTGTGAATGCCCGGCTAGTACCCTGTGCTAGTGGTTTATCTACTGATGTTCAATTAAGGGCATTTG
>AC_000192.1/13619-13699 Murine hepatitis virus strain JHM, complete genome
GGGTTCGGGGTACAAGTGTAAATGCCCGTCTTGTACCCTGTGCCAGTGGCTTGGACACTGATGTTCAATTAAGGGCATTTG
>AF029248.1/13602-13682 Mouse hepatitis virus strain MHV-A59 C12 mutant, complete genome.
GGGTTCGGGGTACAAGTGTAAATGCCCGTCTTGTACCCTGTGCCAGTGGCTTGGACACTGATGTTCAATTAAGGGCATTTG
>AF201929.1/13440-13520 Murine hepatitis virus strain 2, complete genome.
GGGTTCGGGGTACAAGTGTAAATGCCCGTCTTGTACCCTGTGCCAGTGGCTTGGACACTGATGTTCAATTAAGGGCATTTG
>NC_001846.1/13602-13682 Mouse hepatitis virus strain MHV-A59 C12 mutant, complete genome
GGGTTCGGGGTACAAGTGTAAATGCCCGTCTTGTACCCTGTGCCAGTGGCTTGGACACTGATGTTCAATTAAGGGCATTTG
>NC_012936.1/13557-13637 Rat coronavirus Parker, complete genome
GGGTTCGGGGTACAAGTGTAAATGCCCGTCTTGTACCCTGTGCCAGTGGCTTGGACACTGATGTTCAATTAAGGGCATTTG
>JN874562.1/13403-13483 Rabbit coronavirus HKU14 strain HKU14-10, complete genome.
GGGTTCGGGGTGCGAGTGTAGATGCCCGTCTCGTACCCTGTGCCACCGGTCTTTCTACCGATGTTCAATTAAGGGCATTTG
>JQ065048.1/10923-11000 Wigeon coronavirus HKU20 strain HKU20-9243, complete genome.
GAGTGAAGGGTTCAAGTGGTGCCCGCCTTGAACCCATGCGGCCTGGTGCTCAACCTGACCCGCTCGTAAGGGCATTTC
>EF065513.1/12952-13032 Bat coronavirus HKU9-1, complete genome.
GAGTCAGGGGTACTAGTGGAGTAGCCCGTCTAGTACCCCTAGGTTCTGGTGTCCAACCAGATATAGTATTAAGGGCTTTTG
>JQ065049.1/11062-11139 Common-moorhen coronavirus HKU21 strain HKU21-8295, complete genome.
GAGTAAAGGGTTCTAGTGATGCCCGTCTAGAACCCCAACAGTCTGGCACTCAGCCGGATATTGTAAAAAGGGCGTTTC
>AY903460.1/13342-13422 Human coronavirus OC43 strain 19572 Belgium 2004, complete genome.
GGGTTCGGGGTGCGAGTGTAGATGCCCGTCTCGTACCCTGCGCCAGTGGTTTATCTACTGATGTACAATTAAGGGCATTTG
>FJ376620.1/11347-11424 Bulbul coronavirus HKU11-796, complete genome.
GAGTAACGGGTTCTAGTGGTGCCCGACTAGAACCCCAACAGCCAGGCGTTACACCTGATGCTGTTAAACGGGCATTTC
>KJ473821.1/13699-13779 BtVs-BetaCoV/SC2013, complete genome.
GAGTCCGGGGTTCTATTGTAAATGCCCGAATAGAACCCTGTGCTAGTGGACTTTCCACTGATGTCGTTTTTAGGGCATTTG
>KJ473810.1/12224-12298 BtMs-AlphaCoV/GS2013, complete genome.
GAGCAAGGGGCTCTAGTGCAGCTCAACTAGAGCCCTGCAATGGTACTGACACTGATCACTGTGTCCGAGCCTTCG
>JQ173883.1/13606-13686 Murine hepatitis virus strain S/3239-17, complete genome.
GGGTTCGGGGTACAAGTGTAAATGCCCGCCTTGTACCCTGTGCCAGTGGCTTGGACACTGATGTTCAATTAAGGGCATTTG
>AY567487.2/12440-12514 Human Coronavirus NL63, complete genome.
GAGCAAGGGGTTCTAGTGCAGCTCGACTAGAACCCTGCAATGGCACGGACATCGATAAGTGTGTTCGTGCTTTTG
>KF294380.2/12539-12604 Lucheng Rn rat coronavirus isolate Lucheng-19, complete genome.
GGGTGCGGGGCTCTAGTGATGCTCAACTAGAGCCCTGTAGTGAACATCATGTTGTAAGAGCTTTTG
>FJ376621.1/11404-11481 Thrush coronavirus HKU12-600, complete genome.
GAGTAACGGGGTCTAGTGGTGCCCGCCTAGAACCCCTACAACATGGTGTTACACCAGATGTTGTACAAAGGGCTTTTC
>JQ065045.1/11425-11502 Sparrow coronavirus HKU17 strain HKU17-6124, complete genome.
GAGTAACGGGTTCTAGTGATGCCCGGCTAGAACCCCTGCAGCCTGGTACTCAGCCAGATGCTGTAAAAAGGGCCTTCC
>KC164505.2/13433-13513 Betacoronavirus England 1, complete genome.
GAGTCCGGGGTTCTATTGTAAATGCCCGAATAGAACCCTGTTCAAGTGGTTTGTCCACTGATGTCGTCTTTAGGGCATTTG
>AF208067.1/13593-13673 Murine hepatitis virus strain ML-10, complete genome.
GGATTCGGGGTACAAGTGTAAATGCCCGTCTTGTACCCTGTGCCAGTGGCTTGGACACTGATGTTCAATTAAGGGCATTTG
>KX964649.1/12332-12397 Coronavirus AcCoV-JC34, complete genome.
GGGTGCGGGGCTCTAGTGATGCTCAACTAGAGCCCTGTAGTGAGCATCATGTGATAAGGGCTTTTG
>JQ065047.1/11312-11389 Night-heron coronavirus HKU19 strain HKU19-6918, complete genome.
GAGTAAAGGGTTCTAGTGATGCCCGCCTAGAACCCTGCACTAGCGACAACCGACCCGATGTCGTCGTTAGGGCGTTTA
>KR265862.1/11387-11464 Porcine deltacoronavirus strain USA/Ohio444/2014, complete genome.
GAGTAACGGGTTCTAGTGACGCCCGGCTAGAACCCCTGCAGCCTGGAACTCAACCAGATGCTGTAAAAAGGGCCTTCC
>KJ473806.1/12239-12313 BtMr-AlphaCoV/SAX2011, complete genome.
GAGTGCGGGGCTCTAGTGATGCTCGACTAGAGCCCCTAAATGGCACTGACATCGATAGATGTGTTCGTGCTTTTG
>NC_010800.1/12355-12432 Turkey coronavirus, complete genome
GGGTACGGGGTAGCAGTGAGGCTCGGCTGATACCCCTTGCTAGTGGGTGTGACCCTGATGTTGTAAAGCGAGCCTTTG
>M95169.1/12355-12432 Avian infectious bronchitis virus pol protein, spike protein, small virion-associated protein, membrane protein, and nucleocapsid protein genes, complete cds.
GGGTACGGGGTAGCAGTGAGGCTCGGCTGATACCCCTTGCTAGTGGATGTGATCCTGATGTTGTAAAGCGAGCCTTTG
>NC_001451.1/12355-12432 Avian infectious bronchitis virus, complete genome
GGGTACGGGGTAGCAGTGAGGCTCGGCTGATACCCCTTGCTAGTGGATGTGATCCTGATGTTGTAAAGCGAGCCTTTG
>EU022526.1/12373-12450 Turkey coronavirus isolate TCoV-ATCC, complete genome.
GGGTACGGGGTAGCAGTGAGGCTCGGCTGATACCCCTTGCTAATGGATGTGACCCTGATGTTGTAAAGCGAGCCTTTG
>KR822424.1/12352-12429 European turkey coronavirus 080385d, complete genome.
GGGTACGGGGTAGCAGTGAGGCTCGGCTGATACCCCTTGCTAATGGATGTGATCCTGATGTTGTGAAGCGAGCCTTTG
>FN430414.1/12329-12406 Infectious bronchitis virus ITA/90254/2005, complete genome
GGGTACGGGGTAGCAGTGAGGCTCGGCTGATACCCCTTTCTAGTGGATGTGATCCTGATGTTGTAAAGCGAGCCTTTG
>FN430415.1/12324-12401 Infectious bronchitis virus NGA/A116E7/2006, complete genome
GGGTACGGGGTAGCAGTGAGGCTCGGCTGATACCCCTGGCTAGTGGATGTGATCCTGATGTTGTAAAGCGAGCCTTTG
>KM454473.1/12263-12340 Duck coronavirus isolate DK/GD/27/2014, complete genome.
GGGTACGGGGTAGCAGTGAGGCTCGGCTGATACCCCTGTCTGACGGAAATCAACCTCATATTGTAAAACGAGCCTTTG
>NC_006577.2/13601-13681 Human coronavirus HKU1, complete genome
GGGUUCGGGGUACUAGUGUGAAUGCCCGGCUAGUACCCUGUGCUAGUGGUUUAUCUACUGAUGUUCAAUUAAGGGCAUUUG
>NC_003045.1/13342-13422 Bovine coronavirus, complete genome
GGGUUCGGGGUACGAGUGUAGAUGCCCGUCUCGUACCCUGUGCCAGUGGUUUAUCUACUGAUGUACAAUUAAGGGCAUUUG
>NC_006213.1/13341-13421 Human coronavirus OC43 strain ATCC VR-759, complete genome
GGGUUCGGGGUACGAGUGUAGAUGCCCGUCUCGUACCCUGCGCCAGUGGUUUAUCUACUGAUGUACAAUUAAGGGCAUUUG
>NC_026011.1/13485-13565 Betacoronavirus HKU24 strain HKU24-R05005I, complete genome
GGGUUCGGGGUGCGAGUGUAGAUGCCCGUCUCGUACCCUGUGCCAGUGGUUUAUCUACUGAUGUUCAAAAAAGGGCAUUUG
>NC_004718.3/13399-13476 SARS coronavirus, complete genome
GGGUUUGCGGUGUAAGUGCAGCCCGUCUUACACCGUGCGGCACAGGCACUAGUACUGAUGUCGUCUACAGGGCUUUUG
>NC_022103.1/12533-12607 Bat coronavirus CDPHE15/USA/2006, complete genome
GAGCAAGGGGCUCUAGUGCAGCUCGACUAGAGCCCUGUAAUGGCACUGAUACUGAUCAUGUGUAUCGUGCUUUUG
>NC_002306.3/12410-12484 Feline infectious peritonitis virus, complete genome
GAGUGCGGGGUUCUAGUGCAGCUCGACUAGAACCCUGUAAUGGUACUGAUCCAGACCAUGUUAGUAGAGCUUUUG
>NC_038861.1/12339-12413 Transmissible gastroenteritis virus complete genome, genomic RNA
GAGUGCGGGGUUCUAGUGCAGCUCGACUAGAACCCUGCAAUGGUACUGAUCCAGACCAUGUUAGUAGAGCUUUUG
>NC_028806.1/12325-12399 Swine enteric coronavirus strain Italy/213306/2009, complete genome
GAGUGCGGGGUUCUAGUGCAGCUCGACUAGAACCCUGCAAUGGUACUGAUCCAGACCAUGUUAGUAGAGCUUUUG
>NC_017083.1/13520-13600 Rabbit coronavirus HKU14, complete genome
GGGUUCGGGGUGCGAGUGUAGAUGCCCGUCUCGUACCCUGUGCCACCGGUCUUUCUACCGAUGUUCAAUUAAGGGCAUUUG
>NC_014470.1/13298-13375 Bat coronavirus BM48-31/BGR/2008, complete genome
GGGUUUGCGGUGUAAGUGCGGCCCGUCUUACACCGUGCGGCACAGGCACAAGCACUGAUGUCGUUUACAGGGCUUUUG
>NC_030292.1/12123-12197 Ferret coronavirus isolate FRCoV-NL-2010, complete genome
GAGUACGGGGUUCUAGUGGAGCUCGACUAGAACCCUGCAAUGGUACAAACCCUGAUUGUGUUACCAGGGCCUUUG
>NC_009020.1/13686-13766 Bat coronavirus HKU5-1, complete genome
GAGUCCGGGGUUCUAUUGUAAAUGCCCGAAUAGAACCCUGUGCCAGUGGUCUUACCACUGAUGUUGUCUUUAGGGCAUUUG
>NC_023760.1/12300-12374 Mink coronavirus strain WD1127, complete genome
GAGUACGGGGUUCUAGUGGAGCUCGACUAGAACCCUGCAAUGGUACAAGCCCUGAUUGUGUUACAAGGGCUUUUG
>NC_003436.1/12621-12695 Porcine epidemic diarrhea virus, complete genome
GAGUACGGGGCUCUAGUGCAGCUCGACUAGAGCCCUGUAAUGGUACUGAUACACAACAUGUGUAUCGUGCUUUUG
>NC_028833.1/11986-12060 BtNv-AlphaCoV/SC2013, complete genome
GAGUACGGGGCUCUAGUGCAGCUCGACUAGAGCCCUGUAAUGGUUCCGAAACGGACCAUGUUGUGCGUGCUUUUG
>NC_039207.1/13585-13665 Betacoronavirus Erinaceus/VMC/DEU/2012 isolate ErinaceusCoV/2012-174/GER/2012, complete genome
GAGUCAGGGGUUCUAUUGUAGAUGCCCGAAUAGAACCCUGUGCAAGUGGUCUUGCCACUGAUGUCGUUUAUAGGGCAUUUG
>NC_010438.1/12936-13010 Bat coronavirus HKU8, complete genome
GAGUGCGGGGCUCUAGUGCAGCUCGACUAGAGCCCUGUAAUGGUACUGAACCAGAACACGUAAUCCGUGCCUUUG
>NC_034440.1/13207-13287 Bat coronavirus isolate PREDICT/PDF-2180, complete genome
GAGUCCGGGGUUCUAUUGUAAAUGCCCGAAUAGAACCCUGUGCAAGUGGUUUGUCCACUGAUGUCGUUUUUAGGGCAUUUG
>NC_010646.1/12389-12466 Beluga Whale coronavirus SW1, complete genome
GGGUACGGGGUCUCAGUGAAGCUCGACUGAGGCCCUGUGCGUCGGGAUUGUUACCUGAUGUUGUUAAAAGAGCUUUUG
>NC_028824.1/12252-12326 BtRf-AlphaCoV/YN2012, complete genome
GGGCAAGGGGCUCUAGUGCAGCUCGACUAGAGCCCUGUAAUGGUACUGAACCAGAACAUUGUGUUCGUGCUUUUG
>NC_009988.1/12447-12521 Bat coronavirus HKU2, complete genome
GGGCAAGGGGCUCUAGUGCAGCUCGACUAGAGCCCUGUAAUGGUACUGAACCAGAACAUUGUGUUCGUGCUUUUG
>NC_018871.1/12618-12692 Rousettus bat coronavirus HKU10, complete genome
GAGCAAGGGGCUCUAGUGCAGCUCAACUAGAGCCCUGCAAUGGCACUGACACUGAUCAUUGUGUCAGAGCAUUUG
>NC_032107.1/12473-12547 NL63-related bat coronavirus strain BtKYNL63-9a, complete genome
GAGCAAGGGGCUCUAGUGCAGCUCGACUAGAGCCCUGUAAUGGCACGGACAUAGAUAAGUGUGUUCGUGCUUUUG
>NC_005831.2/12440-12514 Human Coronavirus NL63, complete genome
GAGCAAGGGGUUCUAGUGCAGCUCGACUAGAACCCUGCAAUGGCACGGACAUCGAUAAGUGUGUUCGUGCUUUUG
>NC_002645.1/12521-12595 Human coronavirus 229E, complete genome
GAGUCCGGGGCUCUAGUGCCGCUCGACUAGAGCCCUGUAAUGGUACAGACAUAGAUUACUGUGUCCGUGCAUUUG
>NC_009657.1/12651-12725 Scotophilus bat coronavirus 512, complete genome
GAGUGCGGGGCUCUAGUGCAGCUCGACUAGAGCCCUUAAAUGGUUCGGACACACAUCAUGUGUUCCGUGCUUUUG
>NC_025217.1/13932-14009 Bat Hp-betacoronavirus/Zhejiang2013, complete genome
GGGUGCGCGGUGUAAGUGCAGCCCGUCUUACACCGUGUGGCAGUGGUCUUUCCACUGACGUCGUCGUAAGGGCUUUCG
>NC_010437.1/13049-13123 Bat coronavirus 1A, complete genome
GAGCAAGGGGCUCUAGUGCAGCUCGACUAGAGCCCUGUAAUGGUACUGAACCGGAGCAUGUUGUACGCGCCUUUG
>NC_028752.1/12536-12610 Camel alphacoronavirus isolate camel/Riyadh/Ry141/2015, complete genome
GAGUCAGGGGCUCUAGUGCCGCUCGACUAGAGCCCUGCAAUGGUACAGACAUAGAUUAUUGUGUCCGUGCAUUUG
>NC_009019.1/13551-13631 Bat coronavirus HKU4-1, complete genome
GAGUCCGGGGUUCUAGUGUAAAUGCCCGACUAGAACCCUGUUCAAGUGGUCUAACCACUGAUGUCGUUUAUAGGGCAUUCG
>NC_028811.1/12239-12313 BtMr-AlphaCoV/SAX2011, complete genome
GAGUGCGGGGCUCUAGUGAUGCUCGACUAGAGCCCCUAAAUGGCACUGACAUCGAUAGAUGUGUUCGUGCUUUUG
>NC_038294.1/13433-13513 Betacoronavirus England 1, complete genome
GAGUCCGGGGUUCUAUUGUAAAUGCCCGAAUAGAACCCUGUUCAAGUGGUUUGUCCACUGAUGUCGUCUUUAGGGCAUUUG
>NC_019843.3/13434-13514 Middle East respiratory syndrome coronavirus, complete genome
GAGUCCGGGGUUCUAUUGUAAAUGCCCGAAUAGAACCCUGUUCAAGUGGUUUGUCCACUGAUGUCGUCUUUAGGGCAUUUG
>NC_028814.1/12204-12278 BtRf-AlphaCoV/HuB2013, complete genome
GAGCAAGGGGCUCUAGUGCAGCUCAACUAGAGCCCUGUAAUGGUACUGACACUGAUCACUGUGUCCGAGCCUUCG
>NC_030886.1/13084-13164 Rousettus bat coronavirus isolate GCCDC1 356, complete genome
GAGUCCGGGGUGCUAGUGGAGUAGCCCGCCUAGUACCCCAAGGCAUAGGUGUUCAGCCUGAUGUCGUUUUAAGGGCUUUUG
>NC_009021.1/12952-13032 Bat coronavirus HKU9-1, complete genome
GAGUCAGGGGUACUAGUGGAGUAGCCCGUCUAGUACCCCUAGGUUCUGGUGUCCAACCAGAUAUAGUAUUAAGGGCUUUUG
>NC_016994.1/11312-11389 Night-heron coronavirus HKU19, complete genome
GAGUAAAGGGUUCUAGUGAUGCCCGCCUAGAACCCUGCACUAGCGACAACCGACCCGAUGUCGUCGUUAGGGCGUUUA
>NC_032730.1/12539-12604 Lucheng Rn rat coronavirus isolate Lucheng-19, complete genome
GGGUGCGGGGCUCUAGUGAUGCUCAACUAGAGCCCUGUAGUGAACAUCAUGUUGUAAGAGCUUUUG
>NC_011550.1/11593-11670 Munia coronavirus HKU13-3514, complete genome
GAGUAGUGGGUUCCAGUGAAGCCCGACUGGAACCCCAACAGCCAGGUACAAUCCCUGAUGCUGUUAAACGGGCUUUUC
>NC_034972.1/12332-12397 Coronavirus AcCoV-JC34, complete genome
GGGUGCGGGGCUCUAGUGAUGCUCAACUAGAGCCCUGUAGUGAGCAUCAUGUGAUAAGGGCUUUUG
>NC_016996.1/11062-11139 Common-moorhen coronavirus HKU21, complete genome
GAGUAAAGGGUUCUAGUGAUGCCCGUCUAGAACCCCAACAGUCUGGCACUCAGCCGGAUAUUGUAAAAAGGGCGUUUC
>NC_011547.1/11353-11430 Bulbul coronavirus HKU11-934, complete genome
GAGUAACGGGUUCUAGUGGUGCCCGACUAGAACCCCAACAGCCAGGCGUUACACCUGAUGCUGUUAAACGGGCAUUUC
>NC_016992.1/11425-11502 Sparrow coronavirus HKU17, complete genome
GAGUAACGGGUUCUAGUGAUGCCCGGCUAGAACCCCUGCAGCCUGGUACUCAGCCAGAUGCUGUAAAAAGGGCCUUCC
>NC_039208.1/11408-11485 Porcine coronavirus HKU15 strain HKU15-155, complete genome
GAGUAACGGGUUCUAGUGACGCCCGGCUAGAACCCCUGCAGCCUGGAACUCAACCAGAUGCUGUAAAAAGGGCCUUCC
>NC_016991.1/11350-11427 White-eye coronavirus HKU16, complete genome
GAGUAAUGGGUUCUAGUGGUGCCCUGCUAGAACCCUUACAGCCUGGAUCUCAACCAGAUGCUGUUAAACGGGCAUUUC
>NC_011549.1/11404-11481 Thrush coronavirus HKU12-600, complete genome
GAGUAACGGGGUCUAGUGGUGCCCGCCUAGAACCCCUACAACAUGGUGUUACACCAGAUGUUGUACAAAGGGCUUUUC
>NC_016993.1/11435-11512 Magpie-robin coronavirus HKU18, complete genome
GAGUAACGGGGUCCAGUGGCGCCCGCCUGGAACCCCAGCAGCCAGGUACAACCCCUGAUGCUGUAAAAAGGGCAUUUC
>NC_016995.1/10923-11000 Wigeon coronavirus HKU20, complete genome
GAGUGAAGGGUUCAAGUGGUGCCCGCCUUGAACCCAUGCGGCCUGGUGCUCAACCUGACCCGCUCGUAAGGGCAUUUC
>URS00021ED9B3_2697049/11-88 Frameshift Stimulation Element from the SARS-CoV-2 RNA Genome from Severe acute respiratory syndrome coronavirus 2 (PDB 6XRZ, chain A)
GGGUUUGCGGUGUAAGUGCAGCCCGUCUUACACCGUGCGGCACAGGCACUAGUACUGAUGUCGUAUACAGGGCUUUUG
