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cormycin A


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  • Norine ID: NOR00360
  • DOI: 10.26097/nor00360
  • Family: syringomycin
  • Synonym(s): cormycin A;
  • Activity: antibiotic, surfactant
  • Class: lipopeptide
  • Formula: C54H88ClN13O20
  • Monoisotopic mass: 1273.595710031 g/mol
  • Source: norine
  • Contributor (creation): Norine Team [CRIStAL (UMR CNRS 9189), ex-LIFL, France, Charles Viollette Institute, ProBioGEM team, Lille, France, University of Lille, France]
  • Entry information:
    • status: curated
    • last modification date: 2018-12-01 by Emma Ricart Altimiras [Swiss Institute of Bioinformatics, SIB]
    • view all entry history
  • Type: partial cyclic
  • Number of monomers: 10
  • Smiles: CCCCCCCCCCCCC(C(CC(=O)N1[C@H](C(=O)N[C@@H](C(=O)N[C@H](C(=O)N[C@@H](C(=O)N[C@H](C(=O)N[C@H](C(=O)N/C(=C\C)/C(=O)N[C@H](C(=O)N[C@H](C1=O)[C@@H](CCl)O)C(C(=O)O)O)[C@H](C)O)CC2=CN=CN2)CCO)CC(=O)N)CCCN)CO)O)O

  • Graph inference:



  • Monomeric composition :
    1
    C16:0-OH(3.4)
    2
    Ser
    3
    D-Orn
    4
    Asn
    5
    D-Hse
    6
    His
    7
    aThr
    8
    dhAbu
    9
    OH-Asp
    10
    4Cl-Thr
  • Graph representation: C16:0-OH(3.4),Ser,D-Orn,Asn,D-Hse,His,aThr,dhAbu,OH-Asp,4Cl-Thr @1 @0,2,9 @1,3 @2,4 @3,5 @4,6 @5,7 @6,8 @7,9 @1,8

  • Atomic structure:
  • Chemical structure
    rBAN vizualisation:
  • Pseudomonas corrugata
  • gram: negative
  • taxid: 47879 (view NCBI taxonomy browser)

  • Links between organisms producing the cormycin A: Pseudomonas corrugata
  • Structure, conformation and biological activity of a novel lipodepsipeptide from Pseudomonas corrugata: cormycin A
    Scaloni A, Dalla Serra M, Amodeo P, Mannina L, Vitale RM, Segre AL, Cruciani O, Lodovichetti F, Greco ML, Fiore A, Gallo M, D Ambrosio C, Coraiola M, Menestrina G, Graniti A, Fogliano V, The Biochemical journal , 2004, Nov 15,384(Pt 1):25-36.
    DOI: 10.1042/BJ20040422
    pubMed: 15196052


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