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syringopeptin SC 2


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  • Norine ID: NOR00871
  • DOI: 10.26097/nor00871
  • Family: syringopeptin
  • Synonym(s): syringopeptin SC 2;
  • Activity: antibiotic, toxin
  • Class: lipopeptide
  • Formula: C104H168N24O27
  • Monoisotopic mass: 2185.25107629 g/mol
  • Comment: The stereoisomers (D or L form) of the amino acids are not identified.
  • Source: norine
  • Contributor (creation): Norine Team [CRIStAL (UMR CNRS 9189), ex-LIFL, France, Charles Viollette Institute, ProBioGEM team, Lille, France, University of Lille, France]
  • Entry information:
    • status: curated
    • last modification date: 2018-09-12 by Mickael Chevalier [Charles Viollette Institute, ProBioGEM team, Lille, France, University of Lille, France]
    • view all entry history
  • Type: partial cyclic
  • Number of monomers: 23
  • Monomeric composition :
    1
    C12:0-OH(3)
    2
    dhAbu
    3
    Pro
    4
    Val
    5
    Leu
    6
    Ala
    7
    Ala
    8
    Leu
    9
    Val
    10
    dh-Ala
    11
    Ala
    12
    Val
    13
    Ala
    14
    Ala
    15
    dhAbu
    16
    aThr
    17
    Ser
    18
    Ala
    19
    dhAbu
    20
    Ala
    21
    Dab
    22
    Dab
    23
    Tyr
  • Graph representation: C12:0-OH(3),dhAbu,Pro,Val,Leu,Ala,Ala,Leu,Val,dh-Ala,Ala,Val,Ala,Ala,dhAbu,aThr,Ser,Ala,dhAbu,Ala,Dab,Dab,Tyr @1 @0,2 @1,3 @2,4 @3,5 @4,6 @5,7 @6,8 @7,9 @8,10 @9,11 @10,12 @11,13 @12,14 @13,15 @14,16,22 @15,17 @16,18 @17,19 @18,20 @19,21 @20,22 @15,21

  • Atomic structure:
  • Peptide's atomic structure image is not available because smiles is not present.

  • Pseudomonas syringae pv. syringae
  • gram: negative
  • taxid: 321 (view NCBI taxonomy browser)

  • Links between organisms producing the syringopeptin SC 2: Pseudomonas syringae pv. syringae
  • Structural analysis of new syringopeptins by tandem mass spectrometry
    Takemoto JY, Suzuki A, Isogai A, Iguchi H, Nakayama J, Kusai A, Bioscience, biotechnology, and biochemistry , 1995, Jul,59(7):1374-6.
    pubMed: 7670202


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