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pseudobactin


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  • Norine ID: NOR00160
  • Family: pyoverdin
  • Synonym(s): pseudobactin;
  • Activity: siderophore
  • Class: chromopeptide
  • Source: norine
  • Contributor (creation): Norine Team [CRIStAL (UMR CNRS 9189), ex-LIFL, France, Charles Viollette Institute, ProBioGEM team, Lille, France, University of Lille, France]
  • Entry information:
    • status: curated
    • last modification date: 2018-12-01 by Emma Ricart Altimiras [Swiss Institute of Bioinformatics, SIB]
    • view all entry history
  • Type: linear
  • Number of monomers: 7
  • Smiles: N1CC[C@@H](C(=O)NCCCC[C@H](N)C(=O)N[C@H]([C@@H](O)C(O)=O)C(=O)N[C@@H](C)C(=O)N[C@H]([C@@H](C)O)C(=O)N[C@@H](C)C(=O)N[C@H]2C(=O)N(O)CCC2)N2C3C=C(O)C(O)=CC=3C=C(NC(=O)CCC(=O)N)C12

  • Graph inference:



  • Monomeric composition :
    1
    N-Suc
    2
    ChrP
    3
    Lys
    4
    D-OH-Asp
    5
    Ala
    6
    D-aThr
    7
    Ala
    8
    D-OH-cOrn
  • Graph representation: N-Suc,ChrP,Lys,D-OH-Asp,Ala,D-aThr,Ala,D-OH-cOrn @1 @0,2 @1,3 @2,4 @3,5 @4,6 @5,7 @6

  • Atomic structure:
    Chemical structure
  • Pseudomonas fluorescens
  • gram: negative
  • taxid: 136843 (view NCBI taxonomy browser)

  • Links between organisms producing the pseudobactin: Pseudomonas fluorescens
  • A fast screening method for the identification of siderophores from fluorescent Pseudomonas spp. by liquid chromatography/electrospray mass spectrometry
    Budzikiewicz H, Fuchs R, Kilz S, Lenz C, Journal of mass spectrometry : JMS , 1999, Apr,34(4):281-90.
    pubMed: 10226359
  • Structure of pseudobactin A, a second siderophore from plant growth promoting Pseudomonas B10
    Teintze M, Leong J, Biochemistry , 1981, Oct 27,20(22):6457-62.
    pubMed: 7306519


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