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pyoverdin G4R


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  • Norine ID: NOR00166
  • Family: pyoverdin
  • Synonym(s): pyoverdin G4R;
  • Activity: siderophore
  • Class: chromopeptide
  • Formula: C44H60N14O18
  • Monoisotopic mass: 1072.421001186 g/mol
  • Source: norine
  • Contributor (creation): Norine Team [CRIStAL (UMR CNRS 9189), ex-LIFL, France, Charles Viollette Institute, ProBioGEM team, Lille, France, University of Lille, France]
  • Entry information:
    • status: curated
    • last modification date: 2018-12-01 by Emma Ricart Altimiras [Swiss Institute of Bioinformatics, SIB]
    • view all entry history
  • Type: partial cyclic
  • Number of monomers: 8
  • Smiles: C1CC(C(=O)N(C1)O)NC(=O)[C@H](CO)NC(=O)CNC(=O)C2CCN=C(N2)[C@@H]([C@H](C(=O)O)O)NC(=O)[C@H](CCCN)NC(=O)[C@H](CC(=O)O)NC(=O)[C@@H]3CCNC4N3C5=CC(=C(C=C5C=C4NC(=O)CCC(=O)N)O)O

  • Graph inference:



  • Monomeric composition :
    1
    N-Suc
    2
    ChrP
    3
    Asp
    4
    Orn
    5
    D-OH-Asp
    6
    Dab
    7
    Gly
    8
    Ser
    9
    OH-cOrn
  • Graph representation: N-Suc,ChrP,Asp,Orn,D-OH-Asp,Dab,Gly,Ser,OH-cOrn @1 @0,2 @1,3 @2,4,4 @3,3,5 @4,6 @5,7 @6,8 @7

  • Atomic structure:
    Chemical structure
  • Pseudomonas putida
  • gram: negative
  • synonyms: Pseudomonas ovalis,Pseudomonas arvilla,Arthrobacter siderocapsulatus,Pseudomonas striata,Pseudomonas rugosa,Pseudomonas incognita,Pseudomonas convexa,Pseudomonas eisenbergii,Bacillus putidus
  • taxid: 303 (view NCBI taxonomy browser)

  • Links between organisms producing the pyoverdin G4R: Pseudomonas putida
  • A fast screening method for the identification of siderophores from fluorescent Pseudomonas spp. by liquid chromatography/electrospray mass spectrometry
    Budzikiewicz H, Fuchs R, Kilz S, Lenz C, Journal of mass spectrometry : JMS , 1999, Apr,34(4):281-90.
    pubMed: 10226359
  • Bacterial iron transport: 1H NMR determination of the three-dimensional structure of the gallium complex of pyoverdin G4R, the peptidic siderophore of Pseudomonas putida G4R
    Abdallah MA, Atkinson RA, Salah El Din AL, Kieffer B, Lefevre JF, Biochemistry , 1998, Nov 10,37(45):15965-73.
    pubMed: 9843403


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