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syringotoxin B


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  • Norine ID: NOR00358
  • DOI: 10.26097/nor00358
  • Family: syringomycin
  • Synonym(s): syringotoxin B;
  • Activity: surfactant, antibiotic
  • Class: lipopeptide
  • Formula: C48H82ClN11O18
  • Monoisotopic mass: 1135.552782585 g/mol
  • Source: norine
  • Contributor (creation): Norine Team [CRIStAL (UMR CNRS 9189), ex-LIFL, France, Charles Viollette Institute, ProBioGEM team, Lille, France, University of Lille, France]
  • Entry information:
    • status: curated
    • last modification date: 2018-12-01 by Emma Ricart Altimiras [Swiss Institute of Bioinformatics, SIB]
    • view all entry history
  • Type: partial cyclic
  • Number of monomers: 10
  • Smiles: CCCCCCCCCCCC(O)CC(=O)NC1COC(=O)C(NC(=O)C(NC(=O)C(=CC)NC(=O)C(NC(=O)C(CCCN)NC(=O)C(CCO)NC(=O)CNC(=O)C(CCN)NC1(=O))C(C)O)C(O)C(=O)O)C(O)CCl

  • Graph inference:



  • Monomeric composition :
    1
    C14:0-OH(3)
    2
    Ser
    3
    D-Dab
    4
    Gly
    5
    D-Hse
    6
    Orn
    7
    aThr
    8
    dhAbu
    9
    OH-Asp
    10
    4Cl-Thr
  • Graph representation: C14:0-OH(3),Ser,D-Dab,Gly,D-Hse,Orn,aThr,dhAbu,OH-Asp,4Cl-Thr @1 @0,2,9 @1,3 @2,4 @3,5 @4,6 @5,7 @6,8 @7,9 @1,8

  • Atomic structure:
  • Chemical structure
    rBAN vizualisation:
  • Pseudomonas syringae pv. syringae
  • gram: negative
  • taxid: 321 (view NCBI taxonomy browser)

  • Links between organisms producing the syringotoxin B: Pseudomonas syringae pv. syringae
  • Structure of syringotoxin, a bioactive metabolite of Pseudomonas syringae pv. syringae
    Iacobellis NS, Ballio A, Bossa F, Pucci P, Scaloni A, Paci M, Gallo M, Simmaco M, Collina A, Segre A, FEBS letters , 1990, Sep 3,269(2):377-80.
    DOI: 10.1016/0014-5793(90)81197-v
    pubMed: 2401362


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