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geodiamolide F


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  • Norine ID: NOR00608
  • DOI: 10.26097/nor00608
  • Family: geodiamolide
  • Synonym(s): geodiamolide F;
  • Activity: toxin
  • Class: peptide
  • Formula: C27H38ClN3O6
  • Monoisotopic mass: 535.244913673 g/mol
  • Comment: Geodiamolides are putative NRPS products (no synthetase genes identified)
  • Source: norine
  • Contributor (creation): Norine Team [CRIStAL (UMR CNRS 9189), ex-LIFL, France, Charles Viollette Institute, ProBioGEM team, Lille, France, University of Lille, France]
  • Entry information:
    • status: putative
    • last modification date: 2019-04-04 by Maude Pupin [Université Lille 1, France, CRIStAL (UMR CNRS 9189), ex-LIFL, France]
    • view all entry history
  • Type: cyclic
  • Number of monomers: 4
  • Smiles: [H][C@]1(NC(=O)[C@H](C/C(=C/[C@@H](C[C@@H](OC(=O)[C@@H](NC(=O)[C@H](N(C1=O)C)CC2=CC(=C(C=C2)O)Cl)C)C)C)/C)C)[H]

  • Graph inference:



  • Monomeric composition :
    1
    C9:1(4)-Me(2.4.6)-OH(8)
    2
    Gly
    3
    D-Cl-NMe-Tyr
    4
    Ala
  • Graph representation: C9:1(4)-Me(2.4.6)-OH(8),Gly,D-Cl-NMe-Tyr,Ala @1,3 @0,2 @1,3 @0,2

  • Atomic structure:
  • Chemical structure
    rBAN vizualisation:
  • Cymbastela
  • taxid: 85785 (view NCBI taxonomy browser)

  • Links between organisms producing the geodiamolide F: Cymbastela
  • Geodiamolides C to F, new cytotoxic cyclodepsipeptides from the marine sponge Pseudaxinylsa sp.
    Andersen RJ, De Silva ED, Allen TM, Tetrahedron letters , 1990, 31 (4), pp. 489-492


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