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geodiamolide Q


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  • Norine ID: NOR00614
  • DOI: 10.26097/nor00614
  • Family: geodiamolide
  • Synonym(s): geodiamolide Q;
  • Activity: toxin
  • Class: peptide
  • Formula: C28H39ClN3O7
  • Monoisotopic mass: 564.247653327 g/mol
  • Comment: Geodiamolides are putative NRPS products (no synthetase genes identified)
  • Warning: it has the same structure than geodiamolide N
  • Source: norine
  • Contributor (creation): Norine Team [CRIStAL (UMR CNRS 9189), ex-LIFL, France, Charles Viollette Institute, ProBioGEM team, Lille, France, University of Lille, France]
  • Entry information:
  • Type: cyclic
  • Number of monomers: 4
  • Smiles: C[C@@H]\1C[C@@H](OC(=O)[C@@H](NC(=O)[C@H](N(C(=O)[C@@H](NC(=O)[C@H](C/C(=C1)/C)C)CO)C)CC2=CC(=C(C=C2)O)Cl)C)C

  • Graph inference:



  • Monomeric composition :
    1
    C9:1(4)-Me(2.4.6)-OH(8)
    2
    Ser
    3
    D-Cl-NMe-Tyr
    4
    Ala
  • Graph representation: C9:1(4)-Me(2.4.6)-OH(8),Ser,D-Cl-NMe-Tyr,Ala @1,3 @0,2 @1,3 @0,2

  • Atomic structure:
  • Chemical structure
    rBAN vizualisation:
  • Cymbastela
  • taxid: 85785 (view NCBI taxonomy browser)

  • Links between organisms producing the geodiamolide Q: Cymbastela
  • New geodiamolides from the sponge Cymbastela sp. collected in Papua New Guinea
    Andersen RJ, van Soest RW, Coleman JE, Journal of natural products , 1999, Aug,62(8):1137-41.
    DOI: 10.1021/np990155o
    pubMed: 10479320


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