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geodiamolide R


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  • Norine ID: NOR00615
  • DOI: 10.26097/nor00615
  • Family: geodiamolide
  • Synonym(s): geodiamolide R;
  • Activity: toxin
  • Class: peptide
  • Formula: C27H38IN3O7
  • Monoisotopic mass: 643.175443585 g/mol
  • Comment: Geodiamolides are putative NRPS products (no synthetase genes identified)
  • Source: norine
  • Contributor (creation): Norine Team [CRIStAL (UMR CNRS 9189), ex-LIFL, France, Charles Viollette Institute, ProBioGEM team, Lille, France, University of Lille, France]
  • Entry information:
    • status: putative
    • last modification date: 2019-04-04 by Maude Pupin [Université Lille 1, France, CRIStAL (UMR CNRS 9189), ex-LIFL, France]
    • view all entry history
  • Type: cyclic
  • Number of monomers: 4
  • Smiles: C[C@@H]\1C[C@@H](OC(=O)[C@@H](NC(=O)[C@H](N(C(=O)CNC(=O)[C@H](C/C(=C1)/C)C)C)CC2=CC(=C(C=C2)O)I)CO)C

  • Graph inference:



  • Monomeric composition :
    1
    C9:1(4)-Me(2.4.6)-OH(8)
    2
    Gly
    3
    D-I-NMe-Tyr
    4
    Ser
  • Graph representation: C9:1(4)-Me(2.4.6)-OH(8),Gly,D-I-NMe-Tyr,Ser @1,3 @0,2 @1,3 @0,2

  • Atomic structure:
  • Chemical structure
    rBAN vizualisation:
  • Cymbastela
  • taxid: 85785 (view NCBI taxonomy browser)

  • Links between organisms producing the geodiamolide R: Cymbastela
  • New geodiamolides from the sponge Cymbastela sp. collected in Papua New Guinea
    Andersen RJ, van Soest RW, Coleman JE, Journal of natural products , 1999, Aug,62(8):1137-41.
    DOI: 10.1021/np990155o
    pubMed: 10479320


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