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orienticin D


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  • Norine ID: NOR00705
  • Family: orienticin
  • Synonym(s): orienticin D;
  • Activity: antibiotic
  • Class: glycopeptide
  • Formula: C74H91ClN10O26
  • Monoisotopic mass: 1570.5794508440001 g/mol
  • Comment: Two bonds of the central Hpg are due to oxidative ring closure.
  • Source: norine
  • Contributor (creation): Norine Team [CRIStAL (UMR CNRS 9189), ex-LIFL, France, Charles Viollette Institute, ProBioGEM team, Lille, France, University of Lille, France]
  • Entry information:
    • status: curated
    • last modification date: 2018-12-01 by Emma Ricart Altimiras [Swiss Institute of Bioinformatics, SIB]
    • view all entry history
  • Type: other
  • Number of monomers: 10
  • Smiles: CC(C)CC(C(=O)NC2C(=O)NC(CC(N)=O)C(=O)NC8c5cc(Oc1ccc(cc1)C2(O))c(OC4OC(CO)C(O)C(O)C4(OC3CC(C)(N)C(O)C(C)O3))c(c5)Oc6ccc(cc6Cl)C(OC7CC(C)(N)C(O)C(C)O7)C%10NC(=O)C(NC8(=O))c9ccc(O)c(c9)c%11c(O)cc(O)cc%11(C(NC%10(=O))C(=O)O))N(C)C

  • Graph inference:



  • Monomeric composition :
    1
    Asn
    2
    bOH-Tyr
    3
    NdMe-Leu
    4
    Hpg
    5
    D-Glc
    6
    Ere
    7
    bOH-Cl-Tyr
    8
    Ere
    9
    Dhpg
    10
    Hpg
  • Graph representation: Asn,bOH-Tyr,NdMe-Leu,Hpg,D-Glc,Ere,bOH-Cl-Tyr,Ere,Dhpg,Hpg @1,3 @0,2,3 @1 @1,0,4,6,9 @3,5 @4 @3,8,7,9 @6 @6,9 @8,3,6

  • Atomic structure:
    Chemical structure
  • Nocardia orientalis
  • gram: positive
  • synonyms: Amycolatopsis orientalis,Streptomyces orientalis,Amycolatopsis orientalis orientalis
  • taxid: 31958 (view NCBI taxonomy browser)

  • Links between organisms producing the orienticin D: Nocardia orientalis
  • New glycopeptide antibiotics. I. The structures of orienticins
    Kobayashi M, Yoshimura Y, Tsuji N, Kamigauchi T, Terui Y, The Journal of antibiotics , 1988, Jun,41(6):819-22.
    pubMed: 3403380


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