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apramide B


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  • Norine ID: NOR00728
  • DOI: 10.26097/nor00728
  • Family: apramide
  • Synonym(s): apramide B;
  • Activity: unknown
  • Class: lipopeptide
  • Formula: C51H79N8O8S
  • Monoisotopic mass: 963.574157244 g/mol
  • Comment: Apramides are putative NRPS products (no synthetase genes identified). The variants differ on their fatty acid moiety.
  • Source: norine
  • Contributor (creation): Norine Team [CRIStAL (UMR CNRS 9189), ex-LIFL, France, Charles Viollette Institute, ProBioGEM team, Lille, France, University of Lille, France]
  • Entry information:
    • status: putative
    • last modification date: 2018-12-01 by Emma Ricart Altimiras [Swiss Institute of Bioinformatics, SIB]
    • view all entry history
  • Type: linear
  • Number of monomers: 8
  • Smiles: C#CCCCCCC(=O)N(C)C(C)C(=O)N(C)C(C(C)C)C(=O)N3CCCC3(C(=O)N(C)C(C(C)C)C(=O)N(C)C(C(C)C)C(=O)N(C)C(Cc1ccc(cc1)OC)C(=O)N(C)Cc2nccs2)

  • Graph inference:



  • Monomeric composition :
    1
    C8:0:1(7)
    2
    NMe-Ala
    3
    NMe-Val
    4
    Pro
    5
    NMe-Val
    6
    NMe-Val
    7
    NMe-OMe-Tyr
    8
    NMe-Gly-Thz
  • Graph representation: C8:0:1(7),NMe-Ala,NMe-Val,Pro,NMe-Val,NMe-Val,NMe-OMe-Tyr,NMe-Gly-Thz @1 @0,2 @1,3 @2,4 @3,5 @4,6 @5,7 @6

  • Atomic structure:
  • Chemical structure
    rBAN vizualisation:
  • Lyngbya majuscula
  • gram: negative
  • taxid: 158786 (view NCBI taxonomy browser)

  • Links between organisms producing the apramide B: Lyngbya majuscula
  • Apramides A-G, novel lipopeptides from the marine cyanobacterium Lyngbya majuscula
    Luesch H, Moore RE, Paul VJ, Yoshida WY, Journal of natural products , 2000, Aug,63(8):1106-12.
    DOI: 10.1021/np000078t
    pubMed: 10978206


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