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ornibactin C8


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  • Norine ID: NOR00833
  • DOI: 10.26097/nor00833
  • Family: ornibactin
  • Synonym(s): ornibactin C8;
  • Activity: siderophore
  • Class: peptide
  • Formula: C30H56N8O13
  • Monoisotopic mass: 736.396683918 g/mol
  • Source: norine
  • Contributor (creation): Norine Team [CRIStAL (UMR CNRS 9189), ex-LIFL, France, Charles Viollette Institute, ProBioGEM team, Lille, France, University of Lille, France]
  • Entry information:
    • status: curated
    • last modification date: 2018-12-01 by Emma Ricart Altimiras [Swiss Institute of Bioinformatics, SIB]
    • view all entry history
  • Type: linear
  • Number of monomers: 6
  • Smiles: CCCCCC(CC(=O)N(CCCC(C(=O)NC(C(C(=O)O)O)C(=O)NC(CO)C(=O)NC(CCCN(C=O)O)C(=O)NCCCCN)N)O)O

  • Graph inference:



  • Monomeric composition :
    1
    C8:0-OH(3)
    2
    OH-Orn
    3
    D-OH-Asp
    4
    Ser
    5
    Fo-OH-Orn
    6
    Put
  • Graph representation: C8:0-OH(3),OH-Orn,D-OH-Asp,Ser,Fo-OH-Orn,Put @1 @0,2 @1,3 @2,4 @3,5 @4

  • Atomic structure:
  • Chemical structure
    rBAN vizualisation:
  • Burkholderia cepacia
  • gram: negative
  • synonyms: Pseudomonas kingii,Pseudomonas cepacia,Pseudomonas multivorans
  • taxid: 292 (view NCBI taxonomy browser)

  • Links between organisms producing the ornibactin C8: Burkholderia cepacia
  • The ornibactin biosynthesis and transport genes of Burkholderia cenocepacia are regulated by an extracytoplasmic function sigma factor which is a part of the Fur regulon
    Agnoli K, Lowe CA, Farmer KL, Husnain SI, Thomas MS, Journal of bacteriology , 2006, May,188(10):3631-44.
    DOI: 10.1128/JB.188.10.3631-3644.2006
    pubMed: 16672617


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