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pseudomycin B


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  • Norine ID: NOR00861
  • DOI: 10.26097/nor00861
  • Family: syringomycin
  • Synonym(s): pseudomycin B;
  • Activity: antibiotic, surfactant
  • Class: lipopeptide
  • Formula: C51H87ClN12O19
  • Monoisotopic mass: 1206.5898963719999 g/mol
  • Comment: The pseudomycin A is the major pseudomycin.
  • Source: norine
  • Contributor (creation): Norine Team [CRIStAL (UMR CNRS 9189), ex-LIFL, France, Charles Viollette Institute, ProBioGEM team, Lille, France, University of Lille, France]
  • Entry information:
    • status: curated
    • last modification date: 2018-12-01 by Emma Ricart Altimiras [Swiss Institute of Bioinformatics, SIB]
    • view all entry history
  • Type: partial cyclic
  • Number of monomers: 10
  • Smiles: CCCCCCCCCCCC(O)CC(=O)NC1COC(=O)C(NC(=O)C(NC(=O)C(=CC)NC(=O)C(NC(=O)C(CCN)NC(=O)C(CCCCN)NC(=O)C(CC(=O)O)NC(=O)C(CCN)NC1(=O))C(C)O)C(O)C(=O)O)C(O)CCl

  • Graph inference:



  • Monomeric composition :
    1
    C14:0-OH(3)
    2
    Ser
    3
    D-Dab
    4
    Asp
    5
    Lys
    6
    Dab
    7
    aThr
    8
    dhAbu
    9
    OH-Asp
    10
    4Cl-Thr
  • Graph representation: C14:0-OH(3),Ser,D-Dab,Asp,Lys,Dab,aThr,dhAbu,OH-Asp,4Cl-Thr @1 @0,2,9 @1,3 @2,4 @3,5 @4,6 @5,7 @6,8 @7,9 @1,8

  • Atomic structure:
  • Chemical structure
    rBAN vizualisation:
  • Pseudomonas syringae
  • gram: negative
  • taxid: 317 (view NCBI taxonomy browser)

  • Links between organisms producing the pseudomycin B: Pseudomonas syringae
  • Novel bioactive lipodepsipeptides from Pseudomonas syringae: the pseudomycins
    Ballio A, Bossa F, Di Giorgio D, Pucci P, Scaloni A, Paci M, Segre AL, Ferranti P, Strobel GA, FEBS letters , 1994, Nov 21,355(1):96-100.
    DOI: 10.1016/0014-5793(94)01179-6
    pubMed: 7957970


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