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syringopeptin 508A


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  • Norine ID: NOR00873
  • DOI: 10.26097/nor00873
  • Family: syringopeptin
  • Synonym(s): syringopeptin 508A;
  • Activity: antibiotic, toxin
  • Class: lipopeptide
  • Formula: C104H170N24O27
  • Monoisotopic mass: 2187.266726354 g/mol
  • Comment: The amino acid stereochemistry has not been identified.
  • Source: norine
  • Contributor (creation): Norine Team [CRIStAL (UMR CNRS 9189), ex-LIFL, France, Charles Viollette Institute, ProBioGEM team, Lille, France, University of Lille, France]
  • Entry information:
    • status: curated
    • last modification date: 2018-09-12 by Mickael Chevalier [Charles Viollette Institute, ProBioGEM team, Lille, France, University of Lille, France]
    • view all entry history
  • Type: partial cyclic
  • Number of monomers: 23
  • Monomeric composition :
    1
    C12:0-OH(3)
    2
    dhAbu
    3
    Pro
    4
    Val
    5
    Leu
    6
    Ala
    7
    Ala
    8
    Leu
    9
    Val
    10
    Ala
    11
    Ala
    12
    Val
    13
    Ala
    14
    Ala
    15
    dhAbu
    16
    aThr
    17
    Ser
    18
    Ala
    19
    dhAbu
    20
    Ala
    21
    Dab
    22
    Dab
    23
    Tyr
  • Graph representation: C12:0-OH(3),dhAbu,Pro,Val,Leu,Ala,Ala,Leu,Val,Ala,Ala,Val,Ala,Ala,dhAbu,aThr,Ser,Ala,dhAbu,Ala,Dab,Dab,Tyr @1 @0,2 @1,3 @2,4 @3,5 @4,6 @5,7 @6,8 @7,9 @8,10 @9,11 @10,12 @11,13 @12,14 @13,15 @14,16,22 @15,17 @16,18 @17,19 @18,20 @19,21 @20,22 @15,21

  • Atomic structure:
  • Peptide's atomic structure image is not available because smiles is not present.

  • Pseudomonas syringae pv. lachrymans
  • gram: negative
  • taxid: 53707 (view NCBI taxonomy browser)

  • Links between organisms producing the syringopeptin 508A: Pseudomonas syringae pv. lachrymans
  • Novel cyclic lipodepsipeptide from Pseudomonas syringae pv. lachrymans strain 508 and syringopeptin antimicrobial activities
    Grgurina I, Fogliano V, Mannina L, Takemoto JY, Sorensen KN, Cruciani O, Fiore A, Bensaci M, Pocsfalvi G, Antimicrobial agents and chemotherapy , 2005, Dec,49(12):5037-45.
    DOI: 10.1128/AAC.49.12.5037-5045.2005
    pubMed: 16304170


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