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avoparcin-beta


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  • Norine ID: NOR00929
  • DOI: 10.26097/nor00929
  • Family: avoparcin
  • Synonym(s): avoparcin-beta;
  • Activity: antibiotic
  • Class: glycopeptide
  • Formula: C89H101Cl2N9O36
  • Monoisotopic mass: 1941.572626089 g/mol
  • Comment: Avoparcin consists of a mixture of several structurally similar glycopeptide analogs, of which alpha and beta avoparcin are the major components. Two bonds of the central Hpg are due to oxidative ring closure reactions.
  • Source: norine
  • Contributor (creation): Norine Team [CRIStAL (UMR CNRS 9189), ex-LIFL, France, Charles Viollette Institute, ProBioGEM team, Lille, France, University of Lille, France]
  • Entry information:
    • status: curated
    • last modification date: 2018-09-12 by Mickael Chevalier [Charles Viollette Institute, ProBioGEM team, Lille, France, University of Lille, France]
    • view all entry history
  • Type: other
  • Number of monomers: 12
  • Smiles: CNC(c1ccc(cc1)OC2OC(C)C(O)C(O)C2(O))C(=O)NC6C(=O)NC(c3ccc(O)c(c3)Cl)C(=O)NC%12c9cc(Oc4ccc(cc4)C6(OC5OC(CO)C(O)C(O)C5(O)))c(OC8OC(CO)C(O)C(O)C8(OC7CC(N)C(O)C(C)O7))c(c9)Oc%10ccc(cc%10Cl)C(OC%11CC(N)C(O)C(C)O%11)C%14NC(=O)C(NC%12(=O))c%13ccc(O)c(c%13)c%15c(O)cc(O)cc%15(C(NC%14(=O))C(=O)O)

  • Graph inference:



  • Monomeric composition :
    1
    Rha
    2
    NMe-Hpg
    3
    Tyr
    4
    D-Man
    5
    Cl-Hpg
    6
    Hpg
    7
    Ria
    8
    D-Glc
    9
    bOH-Cl-Tyr
    10
    Ria
    11
    Hpg
    12
    Dhpg
  • Graph representation: Rha,NMe-Hpg,Tyr,D-Man,Cl-Hpg,Hpg,Ria,D-Glc,bOH-Cl-Tyr,Ria,Hpg,Dhpg @1 @2,0 @3,4,5,1 @2 @2,5 @4,2,6,8,10 @7,5 @6 @9,5,11,10 @8 @11,5,8 @8,10

  • Atomic structure:
  • Chemical structure
    rBAN vizualisation:
  • Streptomyces candidus
  • gram: positive
  • synonyms: Actinomyces candidus
  • taxid: 67283 (view NCBI taxonomy browser)

  • Links between organisms producing the avoparcin-beta: Streptomyces candidus


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